We are working on adding LocTree3 predictions for all completely sequenced organisms to the database

Eukaryota (119 organisms)

Organism:
LocTree3 predictions
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file with the LocTree3 predictions in
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#Proteins:
Fasta
Mouse click on the number of predicted
proteinsleads to the download source
of the fasta file
7159 Aedes aegypti 15147
9646 Ailuropoda melanoleuca 19302
447093 Ajellomyces capsulata 9214
400682 Amphimedon queenslandica 29511
28377 Anolis carolinensis 17722
43151 Anopheles darlingi 11424
7165 Anopheles gambiae 12072
7460 Apis mellifera 10560
3702 Arabidopsis thaliana 27270
284811 Ashbya gossypii 4760
12957 Atta cephalotes 18043
5865 Babesia bovis 3687
684364 Batrachochytrium dendrobatidis 8610
7091 Bombyx mori 14583
9913 Bos taurus 19798
15368 Brachypodium distachyon 26468
7739 Branchiostoma floridae 28528
6238 Caenorhabditis briggsae 21113
6239 Caenorhabditis elegans 20791
281687 Caenorhabditis japonica 29043
9483 Callithrix jacchus 20882
237561 Candida albicans 9096
9615 Canis familiaris 19661
10141 Cavia porcellus 18635
3055 Chlamydomonas reinhardtii 14195
7719 Ciona intestinalis 16641
51511 Ciona savignyi 11575
246410 Coccidioides immitis 9581
240176 Coprinopsis cinerea 13334
214684 Cryptococcus neoformans 6242
237895 Cryptosporidium hominis 3886
7955 Danio rerio 25632
6669 Daphnia pulex 30118
44689 Dictyostelium discoideum 12729
5786 Dictyostelium purpureum 12347
7227 Drosophila melanogaster 13907
46245 Drosophila pseudoobscura 15568
227321 Emericella nidulans 10525
284813 Encephalitozoon cuniculi 2004
5759 Entamoeba histolytica 7954
9796 Equus caballus 20228
Organism:
LocTree3 predictions
Mouse click on the organism name opens a
file with the LocTree3 predictions in
a new tab
#Proteins:
Fasta
Mouse click on the number of predicted
proteinsleads to the download source
of the fasta file
9031 Gallus gallus 16568
69293 Gasterosteus aculeatus 17996
184922 Giardia intestinalis 7145
229533 Gibberella zeae 13030
3847 Glycine max 52896
9595 Gorilla gorilla 20550
9606 Homo sapiens 20248
6945 Ixodes scapularis 20458
7897 Latimeria chalumnae 18969
5660 Leishmania braziliensis 8101
5671 Leishmania infantum 8045
5664 Leishmania major 8033
9785 Loxodonta africana 19990
9544 Macaca mulatta 21774
9103 Meleagris gallopavo 14110
13616 Monodelphis domestica 21221
81824 Monosiga brevicollis 9084
10090 Mus musculus 21941
59463 Myotis lucifugus 19659
660122 Nectria haematococca 15446
45351 Nematostella vectensis 24428
330879 Neosartorya fumigata 9627
367110 Neurospora crassa 9824
61853 Nomascus leucogenys 18118
8128 Oreochromis niloticus 18624
9258 Ornithorhynchus anatinus 21571
9986 Oryctolagus cuniculus 18901
39947 Oryza sativa 61975
8090 Oryzias latipes 17419
30611 Otolemur garnettii 19435
9598 Pan troglodytes 18320
5888 Paramecium tetraurelia 39349
121224 Pediculus humanus 10761
556484 Phaeodactylum tricornutum 10321
321614 Phaeosphaeria nodorum 15979
145481 Physcomitrella patens 34704
403677 Phytophthora infestans 17609
164328 Phytophthora ramorum 15348
5823 Plasmodium berghei 11656
5825 Plasmodium chabaudi 14614
36329 Plasmodium falciparum 5307
Organism:
LocTree3 predictions
Mouse click on the organism name opens a
file with the LocTree3 predictions in
a new tab
#Proteins:
Fasta
Mouse click on the number of predicted
proteinsleads to the download source
of the fasta file
5851 Plasmodium knowlesi 5097
126793 Plasmodium vivax 5384
73239 Plasmodium yoelii yoelii 7755
13642 Polysphondylium pallidum 12345
9601 Pongo abelii 20212
3694 Populus trichocarpa 41764
54126 Pristionchus pacificus 29078
418459 Puccinia graminis 15688
10116 Rattus norvegicus 24737
246409 Rhizopus delemar 16968
559292 Saccharomyces cerevisiae 6434
9305 Sarcophilus harrisii 18779
6183 Schistosoma mansoni 11709
284812 Schizosaccharomyces pombe 5078
665079 Sclerotinia sclerotiorum 14400
4081 Solanum lycopersicum 34551
4113 Solanum tuberosum 38772
43179 Spermophilus tridecemlineatus 18776
7668 Strongylocentrotus purpuratus 28417
9823 Sus scrofa 21008
59729 Taeniopygia guttata 17328
31033 Takifugu rubripes 15813
312017 Tetrahymena thermophila 24688
99883 Tetraodon nigroviridis 16340
35128 Thalassiosira pseudonana 11610
5874 Theileria annulata 3787
5875 Theileria parva 4068
5811 Toxoplasma gondii 7835
5722 Trichomonas vaginalis 50191
10228 Trichoplax adhaerens 11501
999953 Trypanosoma brucei 8561
5693 Trypanosoma cruzi 10804
656061 Tuber melanosporum 7494
237631 Ustilago maydis 6520
29760 Vitis vinifera 27192
8364 Xenopus tropicalis 18263
284591 Yarrowia lipolytica 6386


Bacteria (865 organisms)

Organism:
LocTree3 predictions
Mouse click on the organism name opens a
file with the LocTree3 predictions in
a new tab
#Proteins:
Fasta
Mouse click on the number of predicted
proteinsleads to the download source
of the fasta file
329726 Acaryochloris marina 7922
522306 Accumulibacter phosphatis 4394
634452 Acetobacter pasteurianus 2705
931626 Acetobacterium woodii 3431
574087 Acetohalobium arabaticum 2251
441768 Acholeplasma laidlawii 1378
762376 Achromobacter xylosoxidans 6782
591001 Acidaminococcus fermentans 2005
568816 Acidaminococcus intestini 2323
525909 Acidimicrobium ferrooxidans 1922
349163 Acidiphilium cryptum 3500
990288 Acidithiobacillus caldus 3035
243159 Acidithiobacillus ferrooxidans 3105
240015 Acidobacterium capsulatum 3351
351607 Acidothermus cellulolyticus 2146
397945 Acidovorax citrulli 4592
232721 Acidovorax sp 4032
470 Acinetobacter baumannii 3600
62977 Acinetobacter baylyi 3230
416269 Actinobacillus pleuropneumoniae 5b 1977
339671 Actinobacillus succinogenes 2068
512565 Actinoplanes missouriensis 8046
134676 Actinoplanes sp 7848
446462 Actinosynnema mirum 6862
1036672 Advenella kashmirensis 3897
746697 Aequorivita sublithincola 3123
866775 Aerococcus urinae 1650
380703 Aeromonas hydrophila 4114
668336 Aggregatibacter actinomycet. 2274
311403 Agrobacterium radiobacter 6222
176299 Agrobacterium tumefaciens 5034
311402 Agrobacterium vitis 4833
349741 Akkermansia muciniphila 2127
393595 Alcanivorax borkumensis 2699
930169 Alcanivorax dieselolei 4316
596154 Alicycliphilus denitrificans 4600
521098 Alicyclobacillus acidocaldarius 3044
679935 Alistipes finegoldii 3046
293826 Alkaliphilus metalliredigens 4431
350688 Alkaliphilus oremlandii 2804
572477 Allochromatium vinosum 3181
314275 Alteromonas macleodii 3926
715451 Alteromonas sp 4325
572547 Aminobacterium colombiense 1857
429009 Ammonifex degensii 2064
452471 Amoebophilus asiaticus 1250
698758 Amphibacillus xylanus 2353
713604 Amycolatopsis mediterranei 8686
443218 Amycolicicoccus subflavus 4676
272123 Anabaena cylindrica 5741
891968 Anaerobaculum mobile 1987
525919 Anaerococcus prevotii 1788
926569 Anaerolinea thermophila 3046
290397 Anaeromyxobacter dehalogenans 4320
404589 Anaeromyxobacter sp 4423
320483 Anaplasma marginale 918
212042 Anaplasma phagocytophilum 1312
491915 Anoxybacillus flavithermus 2730
224324 Aquifex aeolicus 1552
644284 Arcanobacterium haemolyticum 1706
367737 Arcobacter butzleri 2246
572480 Arcobacter nitrofigilis 3108
76114 Aromatoleum aromaticum 4216
861360 Arthrobacter arilaitensis 3288
290340 Arthrobacter aurescens 4445
452863 Arthrobacter chlorophenolicus 4558
290399 Arthrobacter sp 4425
1029718 Arthromitus sp 1482
696747 Arthrospira platensis 5917
573065 Asticcacaulis excentricus 3737
713887 Atelocyanobacterium thalassa 1186
521095 Atopobium parvulum 1351
62928 Azoarcus sp 3969
511995 Azobacteroides pseudotrichon. 846
438753 Azorhizobium caulinodans 4448
640081 Azospira oryzae 3409
862719 Azospirillum lipoferum 6019
322710 Azotobacter vinelandii 4944
1392 Bacillus anthracis 5434
649639 Bacillus cellulosilyticus 4220
226900 Bacillus cereus 5226
66692 Bacillus clausii 4064
272558 Bacillus halodurans 3994
279010 Bacillus licheniformis 4153
592022 Bacillus megaterium 4880
398511 Bacillus pseudofirmus 4120
315750 Bacillus pumilus 3671
439292 Bacillus selenitireducens 3212
224308 Bacillus subtilis 4191
862908 Bacteriovorax marinus 3201
272559 Bacteroides fragilis 4225
693979 Bacteroides helcogenes 3228
667015 Bacteroides salanitronis 3597
226186 Bacteroides thetaiotaomicron 4777
435590 Bacteroides vulgatus 3968
360095 Bartonella bacilliformis 1255
696125 Bartonella clarridgeiae 1280
283166 Bartonella henselae 1465
374463 Baumannia cicadellinicola 595
264462 Bdellovibrio bacteriovorus 3438
395963 Beijerinckia indica 3754
866536 Belliella baltica 3597
471853 Beutenbergia cavernae 4169
367928 Bifidobacterium adolescentis 1604
442563 Bifidobacterium animalis 1484
1147128 Bifidobacterium asteroides 1648
401473 Bifidobacterium dentium 2028
206672 Bifidobacterium longum 1725
1146883 Blastococcus saxobsidens 4766
203907 Blochmannia floridanus 580
360910 Bordetella avium 3310
257313 Bordetella pertussis 3202
340100 Bordetella petrii 4887
224326 Borrelia burgdorferi 1288
1155096 Borrelia crocidurae 1466
446465 Brachybacterium faecium 3047
565034 Brachyspira hyodysenteriae 2409
224911 Bradyrhizobium diazoefficiens 8023
114615 Bradyrhizobium sp 6551
358681 Brevibacillus brevis 5797
633149 Brevundimonas subvibrioides 3320
359391 Brucella abortus 3007
107806 Buchnera aphidicola 572
224915 Buchnera aphidicola 507
372461 Buchnera aphidicola 362
216591 Burkholderia cenocepacia 6862
626418 Burkholderia glumae 5617
391038 Burkholderia phymatum 7386
398527 Burkholderia phytofirmans 7115
272560 Burkholderia pseudomallei 5628
882378 Burkholderia rhizoxinica 3841
640511 Burkholderia sp 6802
269482 Burkholderia vietnamiensis 7348
266265 Burkholderia xenovorans 8504
515622 Butyrivibrio proteoclasticus 3792
273068 Caldanaerobacter subterraneus 2545
351627 Caldicellulosiruptor saccharolyticus 2615
926550 Caldilinea aerophila 3942
511051 Caldisericum exile 1532
768670 Calditerrivibrio nitroreducens 2075
360104 Campylobacter concisus 2049
360105 Campylobacter curvus 1902
360106 Campylobacter fetus 1704
360107 Campylobacter hominis 1683
192222 Campylobacter jejuni 1614
306263 Campylobacter lari 1545
860228 Capnocytophaga canimorsus 2391
521097 Capnocytophaga ochracea 2166
246194 Carboxydothermus hydrogenoform. 2604
479433 Catenulispora acidiphila 8831
190650 Caulobacter crescentus 3715
366602 Caulobacter sp 5348
590998 Cellulomonas fimi 3735
446466 Cellulomonas flavigena 3647
688270 Cellulophaga algicola 4091
867900 Cellulophaga lytica 3269
642492 Cellulosilyticum lentocellum 4123
593907 Cellvibrio gilvus 3127
498211 Cellvibrio japonicus 3701
266779 Chelativorans sp 4510
485918 Chitinophaga pinensis 7150
272561 Chlamydia trachomatis 895
981222 Chloracidobacterium thermophilum 3028
340177 Chlorobium chlorochromatii 1974
290317 Chlorobium phaeobacteroides 2566
331678 Chlorobium phaeobacteroides 2420
194439 Chlorobium tepidum 2249
324602 Chloroflexus aurantiacus 3816
517418 Chloroherpeton thalassium 2694
243365 Chromobacterium violaceum 4382
290398 Chromohalobacter salexigens 3291
1303518 Chthonomonas calidirosea 2798
290338 Citrobacter koseri 4991
31964 Clavibacter michiganensis 3021
459349 Cloacamonas acidaminovorans 1802
699246 Clostridiales genomosp. BVAB3 1553
272562 Clostridium acetobutylicum 3756
1128398 Clostridium acidurici 2837
290402 Clostridium beijerinckii 4946
441771 Clostridium botulinum 1129
935198 Clostridium botulinum 3404
394503 Clostridium cellulolyticum 3259
573061 Clostridium cellulovorans 4171
720554 Clostridium clariflavum 3745
431943 Clostridium kluyveri 3811
386415 Clostridium novyi 2268
195102 Clostridium perfringens 2643
357809 Clostridium phytofermentans 3855
610130 Clostridium saccharolyticum 4083
1042156 Clostridium sp 2346
1121335 Clostridium stercorarium 2661
499177 Clostridium sticklandii 2516
212717 Clostridium tetani 2340
203119 Clostridium thermocellum 3082
1005048 Collimonas fungivorans 4412
167879 Colwellia psychrerythraea 4855
688245 Comamonas testosteroni 4755
469383 Conexibacter woesei 5860
309798 Coprothermobacter proteolyticus 1476
583355 Coraliomargarita akajimensis 3099
1144275 Corallococcus coralloides 8007
700015 Coriobacterium glomerans 1764
548476 Corynebacterium aurimucosum 2515
257309 Corynebacterium diphtheriae 2258
196164 Corynebacterium efficiens 1706
196627 Corynebacterium glutamicum 3087
306537 Corynebacterium jeikeium 2058
645127 Corynebacterium kroppenstedtii 2010
681645 Corynebacterium pseudotuberc 2039
662755 Corynebacterium resistens 2154
504474 Corynebacterium urealyticum 1997
858619 Corynebacterium variabile 2964
227377 Coxiella burnetii 1813
216432 Croceibacter atlanticus 2693
290339 Cronobacter sakazakii 4411
469378 Cryptobacterium curtum 1350
381666 Cupriavidus necator 6576
755178 Cyanobacterium aponinum 3377
292563 Cyanobacterium stanieri 2798
292564 Cyanobium gracile 3229
395961 Cyanothece sp 5188
41431 Cyanothece sp 4294
43989 Cyanothece sp 5211
497965 Cyanothece sp 6495
65393 Cyanothece sp 5595
880070 Cyclobacterium marinum 4965
385025 Cycloclasticus sp 2242
269798 Cytophaga hutchinsonii 3498
159087 Dechloromonas aromatica 4140
639282 Deferribacter desulfuricans 2329
243164 Dehalococcoides mccartyi 1496
552811 Dehalogenimonas lykanthrop. 1606
546414 Deinococcus deserti 3423
319795 Deinococcus geothermalis 2991
745776 Deinococcus gobiensis 4226
709986 Deinococcus maricopensis 3249
937777 Deinococcus peraridilitoris 4146
693977 Deinococcus proteolyticus 2642
243230 Deinococcus radiodurans 3079
398578 Delftia acidovorans 5925
522772 Denitrovibrio acetiphilus 2888
644282 Desulfarculus baarsii 3245
439235 Desulfatibacillum alkenivorans 5165
871963 Desulfitobacterium dichloroeliminans 3275
138119 Desulfitobacterium hafniense 4933
880072 Desulfobacca acetoxidans 2826
177437 Desulfobacterium autotrophicum 4823
651182 Desulfobacula toluolica 4156
577650 Desulfobulbus propionicus 3217
1167006 Desulfocapsa sulfexigens 3482
96561 Desulfococcus oleovorans 3236
485915 Desulfohalobium retbaense 2488
525897 Desulfomicrobium baculatum 3393
706587 Desulfomonile tiedjei 5377
477974 Desulforudis audaxviator 2114
646529 Desulfosporosinus acidiphilus 4445
768704 Desulfosporosinus meridiei 4308
768706 Desulfosporosinus orientis 5168
177439 Desulfotalea psychrophila 3221
485916 Desulfotomaculum acetoxidans 3981
868595 Desulfotomaculum carboxydivorans 2598
760568 Desulfotomaculum kuznetsovii 3361
349161 Desulfotomaculum reducens 3179
696281 Desulfotomaculum ruminis 3733
643562 Desulfovibrio aespoeensis 3254
207559 Desulfovibrio alaskensis 3204
525146 Desulfovibrio desulfuricans 2336
573370 Desulfovibrio magneticus 4545
1322246 Desulfovibrio piezophilus 3261
526222 Desulfovibrio salexigens 3782
882 Desulfovibrio vulgaris 3513
883 Desulfovibrio vulgaris 3169
653733 Desulfurispirillum indicum 2539
589865 Desulfurivibrio alkaliphilus 2583
868864 Desulfurobacterium thermolit. 1494
246195 Dichelobacter nodosus 1273
198628 Dickeya dadantii 4515
515635 Dictyoglomus turgidum 1728
398580 Dinoroseobacter shibae 4030
983548 Dokdonia sp 2968
471854 Dyadobacter fermentans 5678
926556 Echinicola vietnamensis 4487
634503 Edwardsiella ictaluri 3675
479437 Eggerthella lenta 3038
502558 Eggerthella sp 2268
205920 Ehrlichia chaffeensis 1099
445932 Elusimicrobium minutum 1525
929562 Emticicia oligotrophica 4231
716541 Enterobacter cloacae 5306
701347 Enterobacter lignolyticus 4370
399742 Enterobacter sp 4219
Organism:
LocTree3 predictions
Mouse click on the organism name opens a
file with the LocTree3 predictions in
a new tab
#Proteins:
Fasta
Mouse click on the number of predicted
proteinsleads to the download source
of the fasta file
226185 Enterococcus faecalis 3232
768486 Enterococcus hirae 2724
634500 Erwinia billingiae 4777
338565 Erwinia tasmaniensis 3527
650150 Erysipelothrix rhusiopathiae 1676
314225 Erythrobacter litoralis 2992
83333 Escherichia coli 4302
663278 Ethanoligenens harbinense 2648
515620 Eubacterium eligens 2739
903814 Eubacterium limosum 4473
515619 Eubacterium rectale 3514
262543 Exiguobacterium sibiricum 2990
360911 Exiguobacterium sp 3001
550540 Ferrimonas balearica 3757
381764 Fervidobacterium nodosum 1717
59374 Fibrobacter succinogenes 2866
546269 Filifactor alocis 1605
334413 Finegoldia magna 1806
531844 Flavobacteriaceae bacterium 2530
1034807 Flavobacterium branchiophilum 2845
1041826 Flavobacterium columnare 2610
1094466 Flavobacterium indicum 2645
376686 Flavobacterium johnsoniae 4999
402612 Flavobacterium psychrophilum 2417
880071 Flexibacter litoralis 3828
717231 Flexistipes sinusarabici 2171
755732 Fluviicola taffensis 4011
177416 Francisella tularensis 1523
326424 Frankia alni 6570
106370 Frankia sp 4405
298653 Frankia sp 7074
298654 Frankia sp 7024
656024 Frankia symbiont 4014
767434 Frateuria aurantia 3088
190304 Fusobacterium nucleatum 2039
1005058 Gallibacterium anatis 2476
395494 Gallionella capsiferriformans 2837
525284 Gardnerella vaginalis 1352
379066 Gemmatimonas aurantiaca 3864
235909 Geobacillus kaustophilus 3506
471223 Geobacillus sp 3026
481743 Geobacillus sp 6181
404380 Geobacter bemidjiensis 4030
316067 Geobacter daltonii 3752
398767 Geobacter lovleyi 3603
269799 Geobacter metallireducens 3483
243231 Geobacter sulfurreducens 3396
351605 Geobacter uraniireducens 4203
526225 Geodermatophilus obscurus 4754
1085623 Glaciecola nitratireducens 3505
251221 Gloeobacter violaceus 4317
272568 Gluconacetobacter diazotrophicus 2497
290633 Gluconobacter oxydans 2620
526226 Gordonia bronchialis 4599
1112204 Gordonia polyisoprenivorans 5087
411154 Gramella forsetii 3464
391165 Granulibacter bethesdensis 2424
682795 Granulicella mallensis 4781
1198114 Granulicella tundricola 4492
233412 Haemophilus ducreyi 1693
71421 Haemophilus influenzae 1705
862965 Haemophilus parainfluenzae 1968
557723 Haemophilus parasuis serovar 5 1907
349521 Hahella chejuensis 6732
656519 Halanaerobium hydrogeniformans 2234
572479 Halanaerobium praevalens 2043
502025 Haliangium ochraceum 6652
760192 Haliscomenobacter hydrossis 6676
866895 Halobacillus halophilus 4084
748449 Halobacteroides halobius 2429
768066 Halomonas elongata 3359
349124 Halorhodospira halophila 2394
65093 Halothece sp 3664
373903 Halothermothrix orenii 2304
555778 Halothiobacillus neapolitanus 2347
572265 Hamiltonella defensa 2035
1002804 Helicobacter bizzozeronii 1958
936155 Helicobacter felis 1646
235279 Helicobacter hepaticus 1870
679897 Helicobacter mustelae 1396
85962 Helicobacter pylori 1552
498761 Heliobacterium modesticaldum 2807
757424 Herbaspirillum seropedicae 4270
204773 Herminiimonas arsenicoxydans 3257
316274 Herpetosiphon aurantiacus 5227
760142 Hippea maritima 1645
582402 Hirschia baltica 3175
228400 Histophilus somni 1970
573234 Hodgkinia cicadicola 169
608538 Hydrogenobacter thermophilus 190
380749 Hydrogenobaculum sp 1615
415426 Hyperthermus butylicus 1590
717785 Hyphomicrobium sp 4775
228405 Hyphomonas neptunium 3487
283942 Idiomarina loihiensis 2596
945713 Ignavibacterium album 3073
572544 Ilyobacter polytropus 2836
710696 Intrasporangium calvum 3523
743718 Isoptericola variabilis 2859
575540 Isosphaera pallida 3706
290400 Jannaschia sp 4258
471856 Jonesia denitrificans 2481
523791 Kangiella koreensis 2627
880591 Ketogulonicigenium vulgare 3198
266940 Kineococcus radiotolerans 4638
452652 Kitasatospora setae 7409
272620 Klebsiella pneumoniae 4956
378753 Kocuria rhizophila 2303
204669 Koribacter versatilis 4756
521045 Kosmotoga olearia 2079
479435 Kribbella flavida 6880
562970 Kyrpidia tusciae 3104
478801 Kytococcus sedentarius 2514
983544 Lacinutrix sp 2948
272621 Lactobacillus acidophilus 1787
387344 Lactobacillus brevis 2181
321967 Lactobacillus casei 2686
390333 Lactobacillus delbrueckii 1515
334390 Lactobacillus fermentum 1799
257314 Lactobacillus johnsonii 1805
220668 Lactobacillus plantarum 3078
557436 Lactobacillus reuteri 1850
1069534 Lactobacillus ruminis 1807
314315 Lactobacillus sakei 1868
362948 Lactobacillus salivarius 1865
714313 Lactobacillus sanfranciscensis 1232
420890 Lactococcus garvieae 1921
272623 Lactococcus lactis 2222
557598 Laribacter hongkongensis 3200
363253 Lawsonia intracellularis 1289
649349 Leadbetterella byssophila 3413
661367 Legionella longbeachae serogroup 3390
272624 Legionella pneumophila 2867
281090 Leifsonia xyli 1909
456481 Leptospira biflexa serovar Patoc 3713
189518 Leptospira interrogans serogroup 3417
1048260 Leptospirillum ferriphilum 2443
1162668 Leptospirillum ferrooxidans 2382
395495 Leptothrix cholodnii 4317
523794 Leptotrichia buccalis 2206
349519 Leuconostoc citreum 1806
203120 Leuconostoc mesenteroides 1986
1215343 Liberibacter crescens 1370
169963 Listeria monocytogenes serovar 2831
444177 Lysinibacillus sphaericus 4645
458233 Macrococcus caseolyticus 2029
156889 Magnetococcus sp 3579
342108 Magnetospirillum magneticum 4501
697281 Mahella australiensis 2841
221988 Mannheimia succiniciproducens 1947
313603 Maribacter sp 3398
394221 Maricaulis maris 3055
869210 Marinithermus hydrothermalis 2178
443254 Marinitoga piezophila 2032
225937 Marinobacter adhaerens 4352
351348 Marinobacter hydrocarbonoclastic. 4145
717774 Marinomonas mediterranea 4094
400668 Marinomonas sp 4390
643867 Marivirga tractuosa 3738
504728 Meiothermus ruber 3021
526227 Meiothermus silvanus 3364
1191523 Melioribacter roseus 2805
940190 Melissococcus plutonius 1865
265311 Mesoplasma florum 683
634498 Methanobrevibacter ruminantium 2205
349307 Methanosaeta thermophila 1661
481448 Methylacidiphilum infernorum 2126
420662 Methylibium petroleiphilum 4283
265072 Methylobacillus flagellatus 2596
272630 Methylobacterium extorquens 6036
460265 Methylobacterium nodulans 8068
426355 Methylobacterium radiotolerans 6349
426117 Methylobacterium sp 6608
395965 Methylocella silvestris 3793
243233 Methylococcus capsulatus 2920
187303 Methylocystis sp 4004
1091494 Methylomicrobium alcaliphilum 3946
857087 Methylomonas methanica 4403
754477 Methylophaga frappieri 2677
754476 Methylophaga nitratireducent. 2997
583345 Methylotenera mobilis 2321
666681 Methylotenera versatilis 2738
582744 Methylovorus glucosetrophus 2888
856793 Micavibrio aeruginosavorus 2425
979556 Microbacterium testaceum 3633
465515 Micrococcus luteus 2200
449447 Microcystis aeruginosa 5891
1032480 Microlunatus phosphovorus 5189
644283 Micromonospora aurantiaca 6151
696127 Midichloria mitochondrii 1171
548479 Mobiluncus curtisii 1887
1144889 Modestobacter marinus 5201
264732 Moorella thermoacetica 2442
903503 Moranella endobia 401
749219 Moraxella catarrhalis 1881
886377 Muricauda ruestringensis 3412
561007 Mycobacterium abscessus 4914
710421 Mycobacterium chubuense 5745
272631 Mycobacterium leprae 1600
216594 Mycobacterium marinum 5410
262316 Mycobacterium paratuberculosis 4225
710685 Mycobacterium rhodesiae 6076
246196 Mycobacterium smegmatis 6434
189918 Mycobacterium sp 5865
875328 Mycobacterium sp 4124
83332 Mycobacterium tuberculosis 3976
350058 Mycobacterium vanbaalenii 5874
347257 Mycoplasma agalactiae 695
243272 Mycoplasma arthritidis 630
572263 Mycoplasma conjunctivae 684
512564 Mycoplasma crocodyli 689
1246955 Mycoplasma cynos 871
496833 Mycoplasma fermentans 889
710127 Mycoplasma gallisepticum 753
859194 Mycoplasma haemofelis 1524
1212765 Mycoplasma haemolamae 922
347256 Mycoplasma hominis 520
262719 Mycoplasma hyopneumoniae 670
267748 Mycoplasma mobile 603
272632 Mycoplasma mycoides 878
272633 Mycoplasma penetrans 1028
272634 Mycoplasma pneumoniae 684
272635 Mycoplasma pulmonis 778
768700 Mycoplasma suis 844
262723 Mycoplasma synoviae 679
1197325 Mycoplasma wenyonii 650
246197 Myxococcus xanthus 7214
479431 Nakamurella multipartita 5082
457570 Natranaerobius thermophilus 2833
598659 Nautilia profundicola 1724
242231 Neisseria gonorrhoeae 1962
122586 Neisseria meningitidis serogroup B 1997
222891 Neorickettsia sennetsu 932
700598 Niastella koreensis 7135
749222 Nitratifractor salsuginis 2071
387092 Nitratiruptor sp 1843
323097 Nitrobacter hamburgensis 4228
323098 Nitrobacter winogradskyi 2972
472759 Nitrosococcus halophilus 3718
323261 Nitrosococcus oceani 2975
228410 Nitrosomonas europaea 2362
261292 Nitrosomonas sp 3252
323848 Nitrosospira multiformis 2722
1127134 Nocardia cyriacigeorgica 5321
247156 Nocardia farcinica 5917
196162 Nocardioides sp 4856
1205910 Nocardiopsis alba 5465
446468 Nocardiopsis dassonvillei 5453
592029 Nonlabens dokdonensis 3608
551115 Nostoc azollae 3616
63737 Nostoc punctiforme 6507
103690 Nostoc sp 5988
28072 Nostoc sp 5330
279238 Novosphingobium aromaticivorans 3907
511062 Oceanimonas sp 3166
670487 Oceanithermus profundus 2353
221109 Oceanobacillus iheyensis 3483
439375 Ochrobactrum anthropi 4724
709991 Odoribacter splanchnicus 3464
203123 Oenococcus oeni 1675
504832 Oligotropha carboxidovorans 3577
633147 Olsenella uli 1730
262768 Onion yellows phytoplasma 616
452637 Opitutus terrae 4564
357244 Orientia tsutsugamushi 836
867902 Ornithobacterium rhinotracheale 2137
693746 Oscillibacter valericigenes 4489
926562 Owenweeksia hongkongensis 3463
886882 Paenibacillus polymyxa 5974
324057 Paenibacillus sp 6150
694427 Paludibacter propionicigenes 3009
592316 Pantoea sp 5719
712898 Pantoea vagans 4488
435591 Parabacteroides distasonis 3820
765952 Parachlamydia acanthamoebae 2780
318586 Paracoccus denitrificans 4996
402881 Parvibaculum lavamentivorans 3569
314260 Parvularcula bermudensis 2681
272843 Pasteurella multocida 2011
218491 Pectobacterium atrosepticum 4433
701521 Pediococcus claussenii 1836
278197 Pediococcus pentosaceus 1742
485917 Pedobacter heparinus 4232
762903 Pedobacter saltans 3761
1002672 Pelagibacter sp 1445
335992 Pelagibacter ubique 1353
1082931 Pelagibacterium halotolerans 3855
338963 Pelobacter carbinolicus 3282
338966 Pelobacter propionicus 3657
319225 Pelodictyon luteolum 2067
324925 Pelodictyon phaeoclathratiforme 2671
Organism:
LocTree3 predictions
Mouse click on the organism name opens a
file with the LocTree3 predictions in
a new tab
#Proteins:
Fasta
Mouse click on the number of predicted
proteinsleads to the download source
of the fasta file
370438 Pelotomaculum thermopropionicum 2431
272563 Peptoclostridium difficile 3739
123214 Persephonella marina 2042
403833 Petrotoga mobilis 1881
391619 Phaeobacter inhibens 3841
450851 Phenylobacterium zucineum 3788
74109 Photobacterium profundum 5053
243265 Photorhabdus luminescens 4547
1142394 Phycisphaera mikurensis 3215
59748 Phytoplasma australiense 598
482235 Phytoplasma mali 438
530564 Pirellula staleyi 4684
756272 Planctomyces brasiliensis 4685
521674 Planctomyces limnophilus 4236
365044 Polaromonas naphthalenivorans 4850
296591 Polaromonas sp 5421
991905 Polymorphum gilvum 4308
312153 Polynucleobacter necessarius 2071
452638 Polynucleobacter necessarius 1506
879243 Porphyromonas asaccharolytica 1669
242619 Porphyromonas gingivalis 1862
908937 Prevotella dentalis 2492
767031 Prevotella denticola 2361
246198 Prevotella intermedia 2251
264731 Prevotella ruminicola 2760
167539 Prochlorococcus marinus 1744
59920 Prochlorococcus marinus 2135
74547 Prochlorococcus marinus 2811
59919 Prochlorococcus marinus 1925
1171373 Propionibacterium acidipropionici 3289
267747 Propionibacterium acnes 2285
754252 Propionibacterium freudenreichii 2262
767029 Propionibacterium propionicum 2919
290512 Prosthecochloris aestuarii 2302
529507 Proteus mirabilis 3632
264201 Protochlamydia amoebophila 1972
1157951 Providencia stuartii 4198
342610 Pseudoalteromonas atlantica 4255
326442 Pseudoalteromonas haloplanktis 3431
748280 Pseudogulbenkiania sp 3752
208964 Pseudomonas aeruginosa 5548
216595 Pseudomonas fluorescens 6309
220664 Pseudomonas fluorescens 6062
743720 Pseudomonas fulva 4418
399739 Pseudomonas mendocina 4532
160488 Pseudomonas putida 5304
316 Pseudomonas stutzeri 4118
379731 Pseudomonas stutzeri 4077
223283 Pseudomonas syringae pv. tomato 5422
675635 Pseudonocardia dioxanivorans 6558
911045 Pseudovibrio sp 5145
1045855 Pseudoxanthomonas spadix 3139
743721 Pseudoxanthomonas suwonensis 3062
259536 Psychrobacter arcticus 2096
349106 Psychrobacter sp 2332
313595 Psychroflexus torquis 3447
357804 Psychromonas ingrahamii 3506
488538 Puniceispirillum marinum 2533
1007105 Pusillimonas sp 3740
745277 Rahnella aquatilis 4813
266264 Ralstonia metallidurans 5876
402626 Ralstonia pickettii 4850
267608 Ralstonia solanacearum 4985
365046 Ramlibacter tataouinensis 3702
288705 Renibacterium salmoninarum 3411
347834 Rhizobium etli 5897
266835 Rhizobium loti 7235
266834 Rhizobium meliloti 6129
394 Rhizobium sp 6220
272942 Rhodobacter capsulatus 3611
272943 Rhodobacter sphaeroides 4229
234621 Rhodococcus erythropolis 6230
101510 Rhodococcus jostii 8995
338969 Rhodoferax ferrireducens 4387
648757 Rhodomicrobium vannielii 3490
243090 Rhodopirellula baltica 6991
258594 Rhodopseudomonas palustris 4784
316056 Rhodopseudomonas palustris 4822
414684 Rhodospirillum centenum 3802
269796 Rhodospirillum rubrum 3808
518766 Rhodothermus marinus 2844
272947 Rickettsia prowazekii 834
515618 Riesia pediculicola 540
313596 Robiginitalea biformata 3196
585394 Roseburia hominis 3318
357808 Roseiflexus sp 4451
375451 Roseobacter denitrificans 3947
762948 Rothia dentocariosa 2191
680646 Rothia mucilaginosa 1986
983917 Rubrivivax gelatinosus 4505
266117 Rubrobacter xylanophilus 3114
246200 Ruegeria pomeroyi 4259
292414 Ruegeria sp 3832
697329 Ruminococcus albus 3767
213810 Ruminococcus champanellensis 2110
761193 Runella slithyformis 5725
413404 Ruthia magnifica 974
471857 Saccharomonospora viridis 3802
203122 Saccharophagus degradans 3986
405948 Saccharopolyspora erythraea 6838
1179773 Saccharothrix espanaensis 8394
309807 Salinibacter ruber 2770
369723 Salinispora tropica 4483
99287 Salmonella typhimurium 4521
446469 Sanguibacter keddieii 3684
984262 Saprospira grandis 4125
526218 Sebaldella termitidis 4108
640132 Segniliparus rotundus 2989
927704 Selenomonas ruminantium 3338
546271 Selenomonas sputigena 2225
399741 Serratia proteamaculans 4904
326297 Shewanella amazonensis 3617
318161 Shewanella denitrificans 3713
318167 Shewanella frigidimarina 3968
323850 Shewanella loihica 3838
211586 Shewanella oneidensis 3936
398579 Shewanella pealeana 4153
637905 Shewanella violacea 4331
392500 Shewanella woodyi 4843
300267 Shigella dysenteriae serotype 1 3837
630626 Shimwellia blattae 3794
580332 Sideroxydans lithotrophicus 2962
1117647 Simiduia agarivorans 3793
331113 Simkania negevensis 2512
886293 Singulisphaera acidiphila 7074
471855 Slackia heliotrinireducens 2735
343509 Sodalis glossinidius 2487
1002809 Solibacillus silvestris 3767
234267 Solibacter usitatus 7726
929556 Solitalea canadensis 4278
448385 Sorangium cellulosum 9280
479434 Sphaerobacter thermophilus 3448
158189 Sphaerochaeta globosa 2989
158190 Sphaerochaeta pleomorpha 3129
743722 Sphingobacterium sp 5098
452662 Sphingobium japonicum 4071
392499 Sphingomonas wittichii 5285
317655 Sphingopyxis alaskensis 3169
889378 Spirochaeta africana 2747
760011 Spirochaeta coccoides 1809
573413 Spirochaeta smaragdinae 4179
869211 Spirochaeta thermophila 2235
504472 Spirosoma linguale 6837
446470 Stackebrandtia nassauensis 6337
111780 Stanieria cyanosphaera 4705
93061 Staphylococcus aureus 2880
396513 Staphylococcus carnosus 2410
176279 Staphylococcus epidermidis 2488
937773 Staphylococcus pseudintermedius 2436
342451 Staphylococcus saprophyticus 2399
399550 Staphylothermus marinus 1566
639283 Starkeya novella 4392
522373 Stenotrophomonas maltophilia 4316
378806 Stigmatella aurantiaca 8235
519441 Streptobacillus moniliformis 1424
208435 Streptococcus agalactiae serotype V 2103
553483 Streptococcus equi 1838
29390 Streptococcus gordonii 2040
210007 Streptococcus mutans serotype c 1949
171101 Streptococcus pneumoniae 1876
301447 Streptococcus pyogenes serotype M1 842
391295 Streptococcus suis 2170
264199 Streptococcus thermophilus 1561
218495 Streptococcus uberis 1747
68570 Streptomyces albulus 7984
227882 Streptomyces avermitilis 7636
749414 Streptomyces bingchenggensis 9935
1003195 Streptomyces cattleya 7307
443255 Streptomyces clavuligerus 7251
100226 Streptomyces coelicolor 8005
455632 Streptomyces griseus 6967
1133850 Streptomyces hygroscopicus 8940
680198 Streptomyces scabies 8634
862751 Streptomyces sp 6286
953739 Streptomyces venezuelae 7383
479432 Streptosporangium roseum 8863
444179 Sulcia muelleri 226
595499 Sulcia muelleri 240
1051632 Sulfobacillus acidophilus 3567
709032 Sulfuricurvum kujiense 2780
436114 Sulfurihydrogenibium sp 1705
563040 Sulfurimonas autotrophica 2152
326298 Sulfurimonas denitrificans 2080
525898 Sulfurospirillum deleyianum 2239
387093 Sulfurovum sp 2423
292459 Symbiobacterium thermophilum 3297
1140 Synechococcus elongatus 2640
195253 Synechococcus sp 3519
316278 Synechococcus sp 2440
32049 Synechococcus sp 3091
32051 Synechococcus sp 2438
321332 Synechococcus sp 2828
84588 Synechococcus sp 2491
1111708 Synechocystis sp 3423
335543 Syntrophobacter fumaroxidans 3984
645991 Syntrophobotulus glycolicus 3080
335541 Syntrophomonas wolfei 2453
643648 Syntrophothermus lipocalidus 2294
56780 Syntrophus aciditrophicus 3115
203275 Tannerella forsythia 2975
937774 Taylorella equigenitalis 1555
1209989 Tepidanaerobacter acetatoxydans 2563
377629 Teredinibacter turnerae 4242
926566 Terriglobus roseus 3918
401053 Terriglobus saanensis 4158
945021 Tetragenococcus halophilus 2444
85643 Thauera sp 3905
1089553 Thermacetogenium phaeum 2792
644966 Thermaerobacter marianensis 2311
525903 Thermanaerovibrio acidaminovorans 1726
635013 Thermincola potens 2882
1094508 Thermoanaerobacterium sacchar. 2760
717605 Thermobacillus composti 3777
525904 Thermobaculum terrenum 2811
269800 Thermobifida fusca 3072
469371 Thermobispora bispora 3507
638303 Thermocrinis albus 1578
667014 Thermodesulfatator indicus 2166
795359 Thermodesulfobacterium geofontis 1586
289376 Thermodesulfovibrio yellowstonii 1969
309801 Thermomicrobium roseum 2824
471852 Thermomonospora curvata 4847
555079 Thermosediminibacter oceani 2138
391009 Thermosipho melanesiensis 1870
197221 Thermosynechococcus elongatus 2430
416591 Thermotoga lettingae 2033
243274 Thermotoga maritima 1851
648996 Thermovibrio ammonificans 1804
580340 Thermovirga lienii 1831
300852 Thermus thermophilus 2214
1255043 Thioalkalivibrio nitratireducens 3741
396595 Thioalkalivibrio sp 2807
396588 Thioalkalivibrio sulfidiphilus 3250
292415 Thiobacillus denitrificans 2817
765911 Thiocystis violascens 4150
317025 Thiomicrospira crunogena 2184
75379 Thiomonas intermedia 3115
1110502 Tistrella mobilis 5078
595494 Tolumonas auensis 3097
545695 Treponema azotonutricium 3445
906968 Treponema brennaborense 2506
744872 Treponema caldaria 2729
243275 Treponema denticola 2752
243276 Treponema pallidum 1028
545694 Treponema primitia 3496
869209 Treponema succinifaciens 2553
203124 Trichodesmium erythraeum 4320
203267 Tropheryma whipplei 804
649638 Truepera radiovictrix 2901
521096 Tsukamurella paurometabola 4146
869212 Turneriella parva 4074
471821 Uncultured termite group 1 761
273119 Ureaplasma parvum serovar 3 609
543728 Variovorax paradoxus 6237
479436 Veillonella parvula 1837
391735 Verminephrobacter eiseniae 4896
263358 Verrucosispora maris 5941
882102 Vibrio anguillarum 3660
243277 Vibrio cholerae serotype O1 3779
312309 Vibrio fischeri 3805
903510 Vibrio furnissii 4394
223926 Vibrio parahaemolyticus serotype 4810
575788 Vibrio tasmaniensis 4383
196600 Vibrio vulnificus 4981
716544 Waddlia chondrophila 1917
865938 Weeksella virosa 2041
1045854 Weissella koreensis 1336
36870 Wigglesworthia glossinidia brevipalpis 617
163164 Wolbachia pipientis wMel 1155
273121 Wolinella succinogenes 1965
78245 Xanthobacter autotrophicus 4942
380358 Xanthomonas albilineans 3142
190485 Xanthomonas campestris pv. 3837
291331 Xanthomonas oryzae pv. oryzae 3885
406818 Xenorhabdus bovienii 4049
406817 Xenorhabdus nematophila 4393
446471 Xylanimonas cellulosilytica 3412
160492 Xylella fastidiosa 2772
632 Yersinia pestis 3415
871271 Zinderia insecticola 206
63186 Zobellia galactanivorans 4666
655815 Zunongwangia profunda 4617
264203 Zymomonas mobilis 1737


Archaea (86 organisms)

Organism:
LocTree3 predictions
Mouse click on the organism name opens a
file with the LocTree3 predictions in
a new tab
#Proteins:
Fasta
Mouse click on the number of predicted
proteinsleads to the download source
of the fasta file
933801 Acidianus hospitalis 2315
666510 Acidilobus saccharovorans 1495
439481 Aciduliprofundum boonei 1531
272557 Aeropyrum pernix 1679
224325 Archaeoglobus fulgidus 2396
572546 Archaeoglobus profundus 1812
693661 Archaeoglobus veneficus 2048
1056495 Caldisphaera lagunensis 1470
397948 Caldivirga maquilingensis 1957
414004 Cenarchaeum symbiosum 2007
490899 Desulfurococcus kamchatkensis 1467
589924 Ferroglobus placidus 2449
1163730 Fervidicoccus fontis 1377
795797 Halalkalicoccus jeotgali 3756
272569 Haloarcula marismortui 4101
64091 Halobacterium salinarum 2368
523841 Haloferax mediterranei 3413
309800 Haloferax volcanii 3982
469382 Halogeometricum borinquense 3867
485914 Halomicrobium mukohataei 3323
797210 Halopiger xanaduensis 4194
362976 Haloquadratum walsbyi 2545
416348 Halorubrum lacusprofundi 2221
543526 Haloterrigena turkmenica 5073
797302 Halovivax ruber 3077
453591 Ignicoccus hospitalis 1426
583356 Ignisphaera aggregans 1918
374847 Korarchaeum cryptofilum 1596
399549 Metallosphaera sedula 2246
Organism:
LocTree3 predictions
Mouse click on the organism name opens a
file with the LocTree3 predictions in
a new tab
#Proteins:
Fasta
Mouse click on the number of predicted
proteinsleads to the download source
of the fasta file
877455 Methanobacterium lacus 2478
868131 Methanobacterium paludis 2378
420247 Methanobrevibacter smithii 1778
573063 Methanocaldococcus infernus 1432
243232 Methanocaldococcus jannaschii 1785
304371 Methanocella paludicola 2988
259564 Methanococcoides burtonii 2201
419665 Methanococcus aeolicus 1480
267377 Methanococcus maripaludis 1694
456320 Methanococcus voltae 1653
410358 Methanocorpusculum labreanum 1730
368407 Methanoculleus marisnigri 2462
644295 Methanohalobium evestigatum 2237
547558 Methanohalophilus mahii 1973
867904 Methanomethylovorans hollandica 2532
679926 Methanoplanus petrolearius 2768
190192 Methanopyrus kandleri 1684
456442 Methanoregula boonei 2431
593750 Methanoregula formicica 2791
990316 Methanosaeta concilii 2736
1110509 Methanosaeta harundinacea 2341
679901 Methanosalsum zhilinae 1956
188937 Methanosarcina acetivorans 4298
269797 Methanosarcina barkeri 3583
192952 Methanosarcina mazei 3254
339860 Methanosphaera stadtmanae 1531
521011 Methanosphaerula palustris 2633
323259 Methanospirillum hungatei JF-1 3072
187420 Methanothermobacter thermau. 1868
Organism:
LocTree3 predictions
Mouse click on the organism name opens a
file with the LocTree3 predictions in
a new tab
#Proteins:
Fasta
Mouse click on the number of predicted
proteinsleads to the download source
of the fasta file
523846 Methanothermus fervidus 1277
880724 Methanotorris igneus 1743
228908 Nanoarchaeum equitans 535
547559 Natrialba magadii 4171
797303 Natrinema pellirubrum 4097
406552 Natrinema sp 4265
797304 Natronobacterium gregoryi 3599
268739 Natronomonas moolapensis 2720
348780 Natronomonas pharaonis 2764
436308 Nitrosopumilus maritimus 1787
1237085 Nitrososphaera gargensis 3514
263820 Picrophilus torridus 1532
178306 Pyrobaculum aerophilum 2588
186497 Pyrococcus furiosus 2043
694429 Pyrolobus fumarii 1954
330779 Sulfolobus acidocaldarius 2186
273057 Sulfolobus solfataricus 2924
273063 Sulfolobus tokodaii 2761
391623 Thermococcus barophilus 2253
69014 Thermococcus kodakaraensis 2290
523849 Thermococcus litoralis 2492
368408 Thermofilum pendens 1868
1184251 Thermogladius cellulolyticus 1409
273075 Thermoplasma acidophilum 1481
768679 Thermoproteus tenax 1950
633148 Thermosphaera aggregans 1383
351160 Uncultured methanogenic archaeon 3065
572478 Vulcanisaeta distributa 2484



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