ER-GolgiDB (a database of predicted ER and Golgi localization based on sequence homology)



It is Database of predictions for Endoplasmic Reticulum and Golgi Apparatus localization based on sequence homology to experimentally annotated proteins.
How ER and Golgi localization is predicted using the explicit "Accuracy versus Scaled HSSP distance" curves for each localization. The assigned localization is inferred from the homologue that most accurately predicts localization for the protein and the accuracy based on HSSP distance threshold is provided. Subsets of membrane and lumenal predictions are also provided.
You can
  • search the ER-GolgiDB database.
  • download a compressed version of the Database.
From Here
Who are we?
LINKS to subcellular localization related services and documentation
Reference: Wrzeszczynski, K.O. and Rost, B. (2004) Cellular and Molecular Life Sciences. 61: 1341-1353.
Contact
Tel:    +1-212-305-4018 (Kazimierz O. Wrzeszczynski)
Fax:   +1-212-305-7932
Version

November 12, 2010

-Moved from Columbia to TUM  
ExPASy Proteomics Server |  EMBL |  EMBL-EBI