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Found 53 results
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Rost, B.
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2001
Fischer D
,
Elofsson A
,
Rychlewski L
,
Pazos F
,
Valencia A
,
Rost B
,
Ortiz AR
,
Dunbrack, Jr. RL
.
CAFASP2: the second critical assessment of fully automated structure prediction methods
. Proteins. 2001 ;Suppl 5:171-83.
Liu J
,
Rost B
.
Comparing function and structure between entire proteomes
. Protein Sci. 2001 ;10:1970-9.
Eyrich VA
,
Marti-Renom MA
,
Przybylski D
,
Madhusudhan MS
,
Fiser A
,
Pazos F
,
Valencia A
,
Sali A
,
Rost B
.
EVA: continuous automatic evaluation of protein structure prediction servers
. Bioinformatics. 2001 ;17:1242-3.
Rost B
,
Eyrich VA
.
EVA: large-scale analysis of secondary structure prediction
. Proteins. 2001 ;Suppl 5:192-9.
Hauer K
,
Rost B
,
Rutschle K
,
Opitz H
,
Specht N
,
Bartsch P
,
Oster P
,
Schlierf G
.
Exercise training for rehabilitation and secondary prevention of falls in geriatric patients with a history of injurious falls
. J Am Geriatr Soc. 2001 ;49:10-20.
Hellwig P
,
Rost B
,
Mantele W
.
Redox dependent conformational changes in the mixed valence form of the cytochrome c oxidase from p. The reorganization of glutamic acid 278 is coupled to the electron transfer from/to heme a and the binuclear center. denitrificans
. Spectrochim Acta A Mol Biomol Spectrosc. 2001 ;57A:1123-31.
Rost B
.
Review: protein secondary structure prediction continues to rise
. J Struct Biol. 2001 ;134:204-18.
2000
Hediger C
,
Rost B
,
Itin P
.
Cutaneous manifestations in anorexia nervosa
. Schweiz Med Wochenschr. 2000 ;130:565-75.
Cokol M
,
Nair R
,
Rost B
.
Finding nuclear localization signals
. EMBO Rep. 2000 ;1:411-5.
Riebesell U
,
Zondervan I
,
Rost B
,
Tortell PD
,
Zeebe RE
,
Morel FM
.
Reduced calcification of marine plankton in response to increased atmospheric CO2
. Nature. 2000 ;407:364-7.
Rost B
,
Sander C
.
Third generation prediction of secondary structures
. Methods Mol Biol. 2000 ;143:71-95.
1999
Fischer D
,
Barret C
,
Bryson K
,
Elofsson A
,
Godzik A
,
Jones D
,
Karplus KJ
,
Kelley LA
,
MacCallum RM
,
Pawowski K
, et al.
CAFASP-1: critical assessment of fully automated structure prediction methods
. Proteins. 1999 ;Suppl 3:209-17.
Olmea O
,
Rost B
,
Valencia A
.
Effective use of sequence correlation and conservation in fold recognition
. J Mol Biol. 1999 ;293:1221-39.
Gupta RK
,
Anderson R
,
Cecchini D
,
Rost B
,
Xu J
,
Gendreau K
,
Saroff DL
,
Marchant C
,
Siber GR
.
Evaluation of a guinea pig model to assess interference in the immunogenicity of different components of a combination vaccine comprising diphtheria, tetanus and acellular pertussis (DTaP) vaccine and haemophilus influenzae type b capsular polysaccharide
. Biologicals. 1999 ;27:167-76.
Roser W
,
Bubl R
,
Buergin D
,
Seelig J
,
Radue EW
,
Rost B
.
Metabolic changes in the brain of patients with anorexia and bulimia nervosa as detected by proton magnetic resonance spectroscopy
. Int J Eat Disord. 1999 ;26:119-36.
Zemla A
,
Venclovas C
,
Fidelis K
,
Rost B
.
A modified definition of Sov, a segment-based measure for protein secondary structure prediction assessment
. Proteins. 1999 ;34:220-3.
Rost B
,
Roser W
,
Bubl R
,
Radue EW
,
Buergin D
.
MRS of the brain in patients with anorexia or bulimia nervosa
. Hosp Med. 1999 ;60:474-6.
Pazos F
,
Rost B
,
Valencia A
.
A platform for integrating threading results with protein family analyses
. Bioinformatics. 1999 ;15:1062-3.
Rost B
,
Behr J
,
Hellwig P
,
Richter OM
,
Ludwig B
,
Michel H
,
Mantele W
.
Time-resolved FT-IR studies on the CO adduct of Paracoccus denitrificans cytochrome c oxidase: comparison of the fully reduced and the mixed valence form
. Biochemistry. 1999 ;38:7565-71.
Rost B
.
Twilight zone of protein sequence alignments
. Protein Eng. 1999 ;12:85-94.
1998
Andrade MA
,
O'Donoghue SI
,
Rost B
.
Adaptation of protein surfaces to subcellular location
. J Mol Biol. 1998 ;276:517-25.
Rost B
.
Marrying structure and genomics
. Structure. 1998 ;6:259-63.
Zidovetzki R
,
Rost B
,
Pecht I
.
Role of transmembrane domains in the functions of B- and T-cell receptors
. Immunol Lett. 1998 ;64:97-107.
1997
Rost B
.
Better 1D predictions by experts with machines
. Proteins. 1997 ;Suppl 1:192-7.
Rost B
,
Schneider R
,
Sander C
.
Protein fold recognition by prediction-based threading
. J Mol Biol. 1997 ;270:471-80.
Rost B
.
Protein structures sustain evolutionary drift
. Fold Des. 1997 ;2:S19-24.
Rost B
,
O'Donoghue S
.
Sisyphus and prediction of protein structure
. Comput Appl Biosci. 1997 ;13:345-56.
Oster P
,
Hauer K
,
Specht N
,
Rost B
,
Baertsch P
,
Schlierf G
.
[Strength and coordination training for prevention of falls in the elderly]
. Z Gerontol Geriatr. 1997 ;30:289-92.
1996
Rost B
,
Sander C
.
Bridging the protein sequence-structure gap by structure predictions
. Annu Rev Biophys Biomol Struct. 1996 ;25:113-36.
Hellwig P
,
Rost B
,
Kaiser U
,
Ostermeier C
,
Michel H
,
Mantele W
.
Carboxyl group protonation upon reduction of the Paracoccus denitrificans cytochrome c oxidase: direct evidence by FTIR spectroscopy
. FEBS Lett. 1996 ;385:53-7.
Gupta RK
,
Anderson R
,
Cecchini D
,
Rost B
,
Griffin, Jr. P
,
Benscoter K
,
Xu J
,
Montanez-Ortiz L
,
Siber GR
.
Development of a guinea-pig model for potency/immunogenicity evaluation of diphtheria, tetanus acellular pertussis (DTaP) and Haemophilus influenzae type b polysaccharide conjugate vaccines
. Dev Biol Stand. 1996 ;86:283-96.
Rost B
.
PHD: predicting one-dimensional protein structure by profile-based neural networks
. Methods Enzymol. 1996 ;266:525-39.
Rost B
,
Valencia A
.
Pitfalls of protein sequence analysis
. Curr Opin Biotechnol. 1996 ;7:457-61.
Rost B
,
Casadio R
,
Fariselli P
.
Refining neural network predictions for helical transmembrane proteins by dynamic programming
. Proc Int Conf Intell Syst Mol Biol. 1996 ;4:192-200.
Gupta RK
,
Griffin, Jr. P
,
Chang AC
,
Rivera R
,
Anderson R
,
Rost B
,
Cecchini D
,
Nicholson M
,
Siber GR
.
The role of adjuvants and delivery systems in modulation of immune response to vaccines
. Adv Exp Med Biol. 1996 ;397:105-13.
Rost B
,
Fariselli P
,
Casadio R
.
Topology prediction for helical transmembrane proteins at 86% accuracy
. Protein Sci. 1996 ;5:1704-18.
1995
Rost B
,
Sander C
.
Progress of 1D protein structure prediction at last
. Proteins. 1995 ;23:295-300.
Rost B
.
TOPITS: threading one-dimensional predictions into three-dimensional structures
. Proc Int Conf Intell Syst Mol Biol. 1995 ;3:314-21.
Rost B
,
Casadio R
,
Fariselli P
,
Sander C
.
Transmembrane helices predicted at 95% accuracy
. Protein Sci. 1995 ;4:521-33.
1994
Rost B
,
Sander C
.
Combining evolutionary information and neural networks to predict protein secondary structure
. Proteins. 1994 ;19:55-72.
Rost B
,
Sander C
.
Conservation and prediction of solvent accessibility in protein families
. Proteins. 1994 ;20:216-26.
Rost B
,
Sander C
,
Schneider R
.
PHD–an automatic mail server for protein secondary structure prediction
. Comput Appl Biosci. 1994 ;10:53-60.
Rost B
,
Sander C
,
Schneider R
.
Redefining the goals of protein secondary structure prediction
. J Mol Biol. 1994 ;235:13-26.
Rost B
,
Sander C
.
Structure prediction of proteins–where are we now?
. Curr Opin Biotechnol. 1994 ;5:372-80.
Gupta RK
,
Higham S
,
Gupta CK
,
Rost B
,
Siber GR
.
Suitability of the Vero cell method for titration of diphtheria antitoxin in the United States potency test for diphtheria toxoid
. Biologicals. 1994 ;22:65-72.
1993
Rost B
,
Sander C
.
Improved prediction of protein secondary structure by use of sequence profiles and neural networks
. Proc Natl Acad Sci U S A. 1993 ;90:7558-62.
Nitz U
,
Havenith B
,
Rost B
,
Mosny D
,
Ellerbrok G
.
[Locoregional intra-arterial chemotherapy of primary incurable local recurrence of breast cancer]
. Geburtshilfe Frauenheilkd. 1993 ;53:760-7.
Meitinger T
,
Meindl A
,
Bork P
,
Rost B
,
Sander C
,
Haasemann M
,
Murken J
.
Molecular modelling of the Norrie disease protein predicts a cystine knot growth factor tertiary structure
. Nat Genet. 1993 ;5:376-80.
Rost B
,
Sander C
.
Prediction of protein secondary structure at better than 70% accuracy
. J Mol Biol. 1993 ;232:584-99.
Rost B
,
Schneider R
,
Sander C
.
Progress in protein structure prediction?
. Trends Biochem Sci. 1993 ;18:120-3.
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