NORSp: Predictions of long regions without regular secondary structure.

TitleNORSp: Predictions of long regions without regular secondary structure.
Publication TypeJournal Article
Year of Publication2003
AuthorsLiu, J, Rost, B
JournalNucleic Acids Res
Volume31
Issue13
Pagination3833-5
Date Published2003 Jul 1
ISSN1362-4962
KeywordsInternet, Protein Structure, Secondary, Proteins, Sequence Analysis, Protein, Software, Software Design, User-Computer Interface
Abstract

Many structurally flexible regions play important roles in biological processes. It has been shown that extended loopy regions are very abundant in the protein universe and that they have been conserved through evolution. Here, we present NORSp, a publicly available predictor for disordered regions in protein. Specifically, NORSp predicts long regions with NO Regular Secondary structure. Upon user submission of a protein sequence, NORSp will analyse the protein for its secondary structure, presence of transmembrane helices and coiled-coil. It will then return email to the user about the presence and position of disordered regions. NORSp can be accessed from http://cubic.bioc.columbia.edu/services/NORSp/.

Alternate JournalNucleic Acids Res.
PubMed ID12824431
PubMed Central IDPMC168922
Grant List1-P50-GM62413-01 / GM / NIGMS NIH HHS / United States
R01-GM63029-01 / GM / NIGMS NIH HHS / United States