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Title | The PredictProtein server. |
Publication Type | Journal Article |
Year of Publication | 2004 |
Authors | Rost, B, Yachdav, G, Liu, J |
Journal | Nucleic Acids Res |
Volume | 32 |
Issue | Web Server issue |
Pagination | W321-6 |
Date Published | 2004 Jul 1 |
ISSN | 1362-4962 |
Keywords | Internet, Protein Conformation, Protein Structure, Tertiary, Proteins, Sequence Alignment, Sequence Analysis, Protein, Software, User-Computer Interface |
Abstract | PredictProtein (http://www.predictprotein.org) is an Internet service for sequence analysis and the prediction of protein structure and function. Users submit protein sequences or alignments; PredictProtein returns multiple sequence alignments, PROSITE sequence motifs, low-complexity regions (SEG), nuclear localization signals, regions lacking regular structure (NORS) and predictions of secondary structure, solvent accessibility, globular regions, transmembrane helices, coiled-coil regions, structural switch regions, disulfide-bonds, sub-cellular localization and functional annotations. Upon request fold recognition by prediction-based threading, CHOP domain assignments, predictions of transmembrane strands and inter-residue contacts are also available. For all services, users can submit their query either by electronic mail or interactively via the World Wide Web. |
DOI | 10.1093/nar/gkh377 |
Alternate Journal | Nucleic Acids Res. |
PubMed ID | 15215403 |
PubMed Central ID | PMC441515 |