Complete Sequence Analysis: |
| PredictProtein |
Service for sequence analysis and Protein structure Prediction |
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| MetaPP |
Common interface that simplifies the access to a battery of high-quality public protein structure and function prediction servers. |
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| EVA |
EVAluation of automatic protein structure prediction servers |
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Structure: |
| AGAPE |
Fold recognition without folds: Improved and generalized method for sequence-profile and profile-profile comparisons using sequence and predicted 1D structure |
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| CHOP |
CHOPping proteins into structural domain-like fragments |
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| ConSequenceS |
Consensus Sequence Searches with PSI-BLAST |
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DSSPcont |
Continuous assignment of Protein Secondary Structure |
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| MD |
Protein disorder prediction based on orthogonal sources of information |
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| NORSp |
Prediction of NOn-Regular Secondary Structure (NORS) |
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| PROFbval |
Prediction of protein flexibility and rigidity prediction from sequence |
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| PROFcon |
Prediction of inter-residue contacts |
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| ProfTMB |
Prediction of TransMembrane Beta Barrels |
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| TMH-Benchmark |
Evaluate new methods for Trans-Membrane Helix prediction |
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| Ucon |
Prediction of natively unstructured regions through contact maps |
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Function: |
| ECGO |
Prediction of Enzymatic Activity of a Protein Sequence in Terms of Enzyme Commission (EC) Numbers |
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| DISIS |
Prediction of residues involved in DNA binding |
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| ISIS |
Prediction of residues involved in external protein-protein interactions. |
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| LOCnet |
De novo prediction of protein sub-cellular localization |
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| LOCtree |
Prediction of sub-cellular LOCalization for structural genomics targets |
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| PiNat |
Method for assessing the validity of yeast two hybrid experiments results |
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| predictNLS |
Prediction and analysis of Nuclear Localization Signals |
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| SNAP |
Evaluates the effects of single amino acid substitutions on protein function |
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| UniqueProt |
Creating sequence-Unique Protein databases |
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Data-mining: |
| NLProt |
Mining Natural Language text for PROTein names and their UniProt-IDs |
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Viewers: |
| GeneTegrate |
A java based viewer for PredictProtein |
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