Automatic Generation of a Protein-Protein Interaction Database from MEDLINE based on a Hybrid Information Extraction Software
Mika S, Kirsch H, Rost B, Rebholz-Schuhmann D

List with all extracted protein-protein interactions from MedLine using NLProt and a protein protein interaction extraction algorithm:

Download list of PPIs


Format:
ID1 [tab] ID2 [tab] Name1 [tab] Name2( [tab] DIP)?
Note: the 5th column only contains "DIP" if the interaction could also be found in DIP (Database of interacting proteins)