Input sequence>test sequence MARAEEVDGP APGEVLLSPV DGLHNHVIHV ALQEHGWATY AVHPVEAQPA PHPGALLHQV EVPAPLDRVD PYPLIALYHH PRLECPPYSL PNTLLSLPPP HITRRYIEYY GYVTPQPLLI LYHLPLAQLH PTVLEYLVGP RVRHNNTREP EDPVYTLLGR LPSKALPKEV GVCNNLAEPG GPNLIHTNLL PIHVYDRKEG GRLHNTMLCI DPADPPRQID IPNLKHRPGP TRNPSRLPTL IAPESKPPFE GWMSVGQEA TEXT outputThis is an example of the "succinct" output.See the example of "verbose" output here
Result of NORS prediction (Jinfeng Liu & Burkhard Rost)
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Jinfeng Liu, Hepan Tan & Burkhard Rost
J. Mol. Biol. (2002) 322: 53-64
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Sequence length : 259
Secondary structure : Helix=9.7%, Strand=19.3%, Loop=71.0%
window size : 70
Structure content cutoff: 12%
Minimum consecutive exposed residues: 10
NORS : n=NORS region
Secondary structure : h=helix, e=strand, l=loop
Transmembrane helix : m=transmembrane helix
Solvent accessibility: e=exposed, b=buried
NORS region : 187-259
. : . : . : . : . 5
seq MARAEEVDGPAPGEVLLSPVDGLHNHVIHVALQEHGWATYAVHPVEAQPA
NORS ..................................................
SEC lllleellllllleeeeellllllleeeeeehhhllleeeeelleellll
COILS ..................................................
HTM ..................................................
ACC eeebeebeeebebebbbbebeebeebbbbbbbeeeebbbbbbbebebeeb
. : . : . : . : . 10
seq PHPGALLHQVEVPAPLDRVDPYPLIALYHHPRLECPPYSLPNTLLSLPPP
NORS ..................................................
SEC lllllleeeeelllllllllllleeeeellllllllllllllllllllll
COILS ..................................................
HTM ..................................................
ACC eeeebbbbebebebebeebeebbbbbbbbbeebebeebebeeebbebeee
. : . : . : . : . 15
seq HITRRYIEYYGYVTPQPLLILYHLPLAQLHPTVLEYLVGPRVRHNNTREP
NORS ..................................................
SEC lllhhhhhhhleellhhhhhhhlllhhhllllhhhhhlllllllllllll
COILS ..................................................
HTM ..................................................
ACC ebbeebbebbeebeebbbbbbbbbebbebbeebbeebbebebeeeeeeee
. : . : . : . : . 20
seq EDPVYTLLGRLPSKALPKEVGVCNNLAEPGGPNLIHTNLLPIHVYDRKEG
NORS ....................................nnnnnnnnnnnnnn
SEC llleeeeelllllllllllleellllllllllleeellllleeeeellll
COILS ..................................................
HTM ..................................................
ACC eeebbbbbeebeeeebeeebebbeebeeeeeeebbbbebbbbbbbeeeee
. : . : . : . : . 25
seq GRLHNTMLCIDPADPPRQIDIPNLKHRPGPTRNPSRLPTLIAPESKPPFE
NORS nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
SEC lllllleeelllllllllllllllllllllllllllllllllllllllll
COILS ..................................................
HTM ..................................................
ACC eebbbbbbbbbeeeeeeebebeebeeeeeeeeeeeebeebbbeeeeeebe
. : . : . : . : . 30
seq GWMSVGQEA
NORS nnnnnnnnn
SEC lllllllll
COILS .........
HTM .........
ACC ebbeeeeee
//
HTML outputThis is an example of the "succinct" output.See the example of "verbose" output here .
. : . : . : . : . 5
SEQ MARAEEVDGPAPGEVLLSPVDGLHNHVIHVALQEHGWATYAVHPVEAQPA
NORS
SEC EE EEEEE EEEEEEHHH EEEEE EE
COILS
HTM
ACC eee ee eee e e e ee ee eeee e e ee
. : . : . : . : . 10
SEQ PHPGALLHQVEVPAPLDRVDPYPLIALYHHPRLECPPYSLPNTLLSLPPP
NORS
SEC EEEEE EEEEE
COILS
HTM
ACC eeee e e e e ee ee ee e ee e eee e eee
. : . : . : . : . 15
SEQ HITRRYIEYYGYVTPQPLLILYHLPLAQLHPTVLEYLVGPRVRHNNTREP
NORS
SEC HHHHHHH EE HHHHHHH HHH HHHHH
COILS
HTM
ACC e ee e ee ee e e ee ee e e eeeeeeee
. : . : . : . : . 20
SEQ EDPVYTLLGRLPSKALPKEVGVCNNLAEPGGPNLIHTNLLPIHVYDRKEG
NORS NNNNNNNNNNNNNN
SEC EEEEE EE EEE EEEEE
COILS
HTM
ACC eee ee eeee eee e ee eeeeeee e eeeee
. : . : . : . : . 25
SEQ GRLHNTMLCIDPADPPRQIDIPNLKHRPGPTRNPSRLPTLIAPESKPPFE
NORS NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
SEC EEE
COILS
HTM
ACC ee eeeeeee e ee eeeeeeeeeeee ee eeeeee e
. : . : . : . : . 30
SEQ GWMSVGQEA
NORS NNNNNNNNN
SEC
COILS
HTM
ACC e eeeeee
//
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