--- -------------------------------------------------------------------------------- --- --- All proteins with at least 4 transmembrane helices in Campylobacter jejuni --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 116 cj1587c 6 in 108 543 8 1 -8.18 36,66,132,161,255,281 MPFIMELLKQNKLKLISFLL ISELKGENIKELAKNLVEKF 117 cj0901 6 in 31 247 8 5 -8.62 24,74,110,132,197,234 LNQKNIRIFVFFVIIILWGY VSVKIFSYFAKKLELRMNKN 118 cj0501 6 in 18 246 9 4 -9.39 48,103,129,167,201,230 VYFASFAYNSNFGNVYSGMV GFLSWVVLEGSSIKTDYFRW 119 cj0578c 6 in 11 245 9 4 -9.99 37,88,132,176,206,229 MFEELRPHLIELRKRLFISV GLSILIVQKVNPAPKDKESD 120 cj0614 6 in 10 304 9 5 -10.73 33,95,140,171,224,292 LLKEKIIKFALFLCAFVSVI TLIINMFSVYLINRFHKRKN 121 cj1583c 6 in 9 314 9 4 -11.13 25,115,154,195,255,299 VLKRLVFSIFIAFFSTFLCF TFLSDIVARILNPRLRRLDF 122 cj1163c 6 in 6 316 3 2 -3.23 64,89,127,160,209,231 MYKFLSHEPLANKSCHHNHE LLHEFEIGHITIQPIRSENE 123 cj0593c 6 in 5 210 3 3 -3.52 50,87,109,136,169,194 MEINALTITTLYIIGISAEG ARLLAIKYQWSLPIFSYNEE 124 cj0676 6 in 4 289 2 0 -2.27 18,86,110,150,215,263 MGIIFIISLLLIYFSEKMSN LYGIKESQCLKNKINSLQKK 125 cj1068 6 in 4 368 7 0 -7.60 29,51,136,310,332,359 MRSLLLLIVILILGIKFYSI AILLSLMLFATYNDISRIIG 126 cj1114c 6 in 4 242 9 4 -9.06 41,104,147,175,207,230 MNNRPQLIYILPNLFTAASA YGIIRVLYTIIVSKFKTRNQ 127 cj1119c 6 in 4 297 9 2 -10.14 66,149,175,212,258,287 MYIKDIQRFEDNRYRARAYM SLLLLGLSVYLFTVKYKNNN 128 cj1212c 6 in 4 268 7 5 -7.14 46,103,143,180,211,243 VKNFFTILLNLRDKEILNYA YYFLNHNHNEGNKIRKNTKK 129 cj0378c 6 in 3 179 9 3 -15.26 28,52,87,120,149,171 MQTKYFKFLAYFSFIISLIY WSALIIALFYFIVRYTKTLK 130 cj1003c 6 in 3 172 9 2 -13.45 23,63,92,125,149,171 LLTIFLIFLNILCYFLISYD WYGHIFGFMCGYILAKIKEV 131 cj0948c 6 in 2 295 7 1 -7.12 36,58,96,131,166,190 MSLQKKATLVASLCAIVLAL KWDIQIHLDPYDDAEQERQR 132 cj0033 6 in 1 593 4 1 -4.86 389,432,485,511,535,579 MEELTKEQRQIIEEEIKKEI LLALVLFSLQKTARKNSIVP 133 cj0199c 6 in 1 373 4 1 -4.22 25,56,99,153,181,274 MKKWIFIVFCFILGFIIHIF DSLANPQLKINGSEFSNMDL 134 cj0313 6 in 1 352 0 3 -0.82 29,72,117,294,320,344 MWIFFRFISGIYLKNFFIIF GIVVPIIILGCLSAYMYYKH 135 cj0552 6 in 1 235 9 1 -14.70 30,75,115,137,183,215 LWRWLMEWLLLASIPLIVLG RLYLFDKRLEKTYKGLSDDK 136 cj1210 6 in 1 185 9 3 -9.77 31,62,104,133,155,179 MQDMIDTLIKYGYIVLFFYS PLFLLFLAGIIWLYLSKFSK 137 cj1470c 6 in 1 279 7 1 -7.67 77,99,180,207,231,272 MKFYEVEFLKNNQNYTKTIK YFFMVFSLLLKMEFQYLKLL 138 cj1493c 6 in 1 219 1 4 -1.84 21,69,98,151,184,212 VSIDFLAIISVAFLSSFGHC SYGVIVCYGINLAYIGFKAF 139 cj0467 6 out 23 233 2 0 2.48 40,75,121,158,183,221 MDFDFILAQAPAFLTAAWLT LCIILPLSFILLKFEKRLLH 140 cj0882c 6 out 19 724 1 0 2.00 55,94,143,232,272,324 MAKNKIVDLVFPFLGPLIAP SFAEIAENTNFNTEGIIRIE 141 cj0301c 6 out 16 224 4 2 4.37 32,66,107,162,184,214 VLDPAFLQTLYLTFKLAFIT FIFSFLVLFSLYFINKKMSF 142 cj0782 6 out 15 260 4 1 4.85 31,55,79,136,170,192 VMKYLIARRIVQLGILALFS RCIEVCNDDALNFNIFDLRN 143 cj0369c 6 out 12 458 8 3 8.64 32,69,98,146,184,322 MQGHITNYTKKRYFVYLIAS FRKSIFVYPKSTLIKDKNEL 144 cj0238 6 out 9 627 7 0 7.32 266,313,346,390,412,434 MKKIIFSLCFFILHLGAQEF PSRSIYIENLPPLDLQAKAI 145 cj0167c 6 out 3 203 9 5 12.94 34,73,96,142,164,197 LIIISSSIFYKILGFVMDFY LGGLVLIILGVKILIEHLFF 146 cj0205 6 out 3 267 3 4 3.10 69,114,158,190,230,256 MENLYALILGIIEGLTEFLP GFVFFYLYYSGILNAGSEFK 147 cj1111c 6 out 3 214 9 5 13.46 29,72,97,144,173,204 LIVFSSMGSELYLMFFAAIT VFIVAMGFKMIIVGLKDIFN 148 cj1049c 6 out 2 199 9 4 12.21 28,66,88,138,166,190 MFDSFLSGVFLGFGVSVPFG IISAIIIEYFALNLLYKTFL 149 cj1130c 5 in 219 568 1 0 -1.59 45,96,184,281,308 LGKTVLKKLFFILSKEDKNF STITQCDKVYRLEHGKLKEE 150 cj0357c 5 in 11 202 9 7 -10.31 20,76,103,140,179 MENLIIYAFIYLLGSIPFGL IVYKHLPNIKRLIFKEECKV 151 cj0182 5 in 4 402 7 4 -7.32 37,153,218,263,351 VMIMFSSFFKSKKWALWAYL TQLRSIYKRLKEFEKNISYK 152 cj0256 5 in 4 512 9 1 -9.54 26,65,87,129,162 MLRLTWFQFTFFNSLMIVLL VKTSVYEPEYDLLNPKLKAN 153 cj1391 5 in 3 178 1 9 -1.89 56,94,127,151,176 MVISTFVAIIFEMIRYKSVV RTAIPMLVAAIVNVIMTYIY 154 cj0408 5 in 2 260 9 4 -13.31 50,96,145,185,230 MRELIEGYLGKSIEGKKSKM NQTQTTAMIKNYNGANYEYT 155 cj0017c 5 in 1 508 9 0 -12.05 33,68,90,131,173 MNEINKTKNFYTLMCLAGFL KDGKINILSYQDGANKLYTL 156 cj0987c 5 in 1 321 9 2 -14.74 33,68,233,278,308 MEKSLLFHFRRIGVEFIIFS FLQNLVLIQIFAVLSGIFYS 157 cj1055c 5 in 1 657 9 1 -9.87 24,73,108,168,200 MRKILLQIFIFSVLFIATFA FDKFYRELNLYQLAERLGIS 158 cj1204c 5 out 65 226 5 5 5.16 36,96,122,159,209 MKDLFLFSSLLDASHTFSYF FIFMILTYVYLAGATVVEEG 159 cj0919c 5 out 25 219 8 6 8.74 40,74,102,154,206 MENVFNAQNIEFLMQGLFLT IICFSLSMLVRYYAKKTAYI 160 cj0920c 5 out 25 250 9 5 10.99 67,107,132,196,234 MNESVGFVEHLRQILTSWGL YPLAYFAKAYENKLKKAHLT 161 cj0468 5 out 21 218 9 5 9.47 41,74,103,166,207 MLELLNTDTLLRLWQGLFVT IFFILCYPITLYSRKLEKKW 162 cj1168c 5 out 9 200 8 7 8.17 43,70,131,158,189 MQEIISFIVETASAWGYLGI IVFVILASLIYIKIKKPFKK 163 cj1092c 5 out 5 323 0 4 0.28 38,157,195,257,284 MQFFSEKKIYDFMRMRFAAI EKAKRKQDKERNRAMYEKGT 164 cj1165c 5 out 3 164 9 1 14.84 23,48,71,104,148 MIEFILRDMFFAAVAGFGFA SVTLLIFFEQSFMMTRHAKK 165 cj1276c 5 out 1 268 0 3 0.23 28,166,196,222,260 MKFFKTHLSLILPLLFMMFA FLATLFICLLCVNTVMFKVK 166 cj1412c 5 out 1 373 5 0 5.84 106,132,161,183,257 MDREVFYIAGYDPKSYRFYY GDYDFFSFIIMPKFLEEKVK 167 cj1509c 5 out 1 310 9 4 9.31 75,118,155,214,256 MRKVFVTLLLSVVSLFAYGS KELSNKKQIEPSFSYDPNVK 168 cj1539c 5 out 1 239 9 6 11.46 62,94,129,180,231 MLKLLILKRIFLDYIFDGFK ALVLILIAFCLNFITHKLKR 169 cj1560 5 out 1 213 9 0 14.80 27,115,155,177,210 MLFVTFGLKLSLIYVVFLIF FLFVMIILGVAISFGIFINL 170 cj0820c 4 in 19 244 1 5 -1.91 67,103,200,229 LKKILLFLLLSMSLFAAEAT IFVLVDGWNLLVQRLVESFV 171 cj1570c 4 in 15 172 9 8 -10.59 35,73,112,159 MIENLAFVFFSVVVLGFFGI LLIALVCAIVLTHKELTKEK 172 cj1628 4 in 13 166 5 4 -5.69 22,52,106,145 LILIINLFFIQYNLLKFISI YNALLRKVSLLSNAYKANKN 173 cj0335 4 in 11 362 9 3 -12.60 52,107,164,207 MAGEDQEKTEEPTSKKIEDA LGFVYNTNNKSRLAGQVKKG 174 cj0337c 4 in 9 258 9 3 -11.21 25,49,170,200 MDLSTILGMVLAVTSISVGD EAKLFNFLSHDDPRISQFDK 175 cj0361 4 in 9 156 9 3 -20.88 27,77,104,141 MAKTFKFIFYFWGAFVLVFA SVALILIQEIFKKRKKDDRM 176 cj1174 4 in 8 102 2 9 -2.06 19,49,75,98 MYIFIIVLSALLDIVANLLL LNKIGILGIIIVIIAVFLLN 177 cj0958c 4 in 7 528 9 0 -11.07 29,351,424,501 VNNSNNIFQQKRILLAVVIS VQQWVINKIFAKEHHKKTSG 178 cj1067 4 in 7 178 5 0 -5.59 37,59,102,162 MNLPNILAIFRMVLAPLLFF TLYSGFEYIYTYIKAQKKGE 179 cj1265c 4 in 7 238 9 5 -11.28 48,91,157,211 MSIYKEAFMQNKEEKLQRKA GKDGAMDAIISGYKFVKEEQ 180 cj0309c 4 in 6 104 6 6 -6.20 20,50,77,99 MEWFYLFLATACEIFGVVIM FLKLFLIAVIITCTAGLKFL 181 cj0310c 4 in 5 124 0 9 -0.96 39,65,91,113 LFYKYYVNLRLHVNEKFNIN LVLIAILLLSIIALKWVSKE 182 cj0721c 4 in 4 156 6 8 -6.32 27,70,108,147 LKAVNLFLLASIIGVELILG IKIILIMQVFLYFLSFKIAK 183 cj1093c 4 in 4 526 5 2 -5.01 387,416,476,498 MRNSKINYRLIIFIAVFIFG YFMQRIEKNNNTRFWFGYRR 184 cj1120c 4 in 4 590 9 1 -21.43 32,63,98,123 MIFYKSKRLAFFLTSDIVLI EDISEALLKIVPEFKHNKEG 185 cj0341c 4 in 3 147 9 3 -14.17 26,54,113,138 MFDFLYNDISYLGLFMVCFL FFILLGKLSRYTFIIFIANS 186 cj0517 4 in 3 122 3 2 -3.37 31,55,84,118 LLNTLLVVGFGGFIGAILRM NIILNVFLCLFAAWLGFLIF 187 cj0654c 4 in 3 152 9 7 -13.64 35,65,99,139 LDIFREKNIYFSSIGKFTLG ILLILKKPINKILKINIKEK 188 cj1389 4 in 3 159 9 5 -14.11 19,43,97,140 MLGIVFSLFSVFLLVFMLYK LLLMVTMYPILVLLVFQNFL 189 cj1122c 4 in 2 202 3 1 -3.97 40,90,128,150 LHFNNNLVVHYIVNPSPLGW FESIYKKEDLEKLKNWYENK 190 cj0569 4 in 1 289 0 1 -0.88 59,97,174,245 LENKFKINYDQTTTNGRNGT TCKILLIEAHNKSKPFKEIL 191 cj0598 4 in 1 480 9 2 -11.82 45,72,151,193 MDIKSDEISELVLPEGKDAR QAEISKQESNDELKNEDKEN 192 cj0846 4 in 1 374 9 1 -17.97 19,54,96,128 MIFLIFSFIVLLIFGLANVY GPSLRVFAPSEIVILNLKGK 193 cj0851c 4 in 1 167 9 7 -11.81 27,51,126,158 MEHKKALFCIFAIIHLFFWI LLVCVFIFILYIKKYESKKN 194 cj0928 4 in 1 198 9 7 -13.30 41,65,150,181 MEEFLKNLLYQYKDLAYIII LLLFGFKQMEKAILKDKRKK 195 cj0941c 4 in 1 401 6 3 -6.30 45,289,345,384 LNKSVLKYLLFKYLRFDKEQ SSFYPAKKATQINILDTLRN 196 cj1452 4 in 1 237 7 3 -7.49 36,88,152,224 LDILKLAIKDFLSLKFLKFA FFVIFLTHLSYQRILKLKAK 197 cj1474c 4 in 1 472 1 0 -1.03 19,117,352,457 MIRLILILINILFCHYLYAL PSIVDSVNAPSLKDLGFKHY 198 cj1661 4 in 1 430 8 3 -8.40 38,323,373,412 MMLAKMIFNSIFKNKIQKFL GCLLPIKNITQLSAAGVLYG 199 cj1662 4 in 1 372 9 4 -9.87 42,268,322,356 MVDKFFLNELFKSISFSYQR AAFFPIKRALKINVCENLKG 200 cj0803 4 out 208 580 1 1 1.06 41,82,171,270 MHNEMNLKEVLIRFKPFYKR LQTCSLYQKFKSKEKTKPSF 201 cj0183 4 out 14 452 9 1 9.26 42,100,138,176 LDPSQVLDLNQTSTASFDAG KMDGNSIERVKVVKKTNKDE 202 cj0830 4 out 14 138 9 5 11.11 30,60,99,133 MEEFYPYTLTIHLLCAILFI FVLCIAIVILAKLMNYFFIP 203 cj1173 4 out 6 113 1 9 1.72 29,56,81,105 LNIAKKELFVAWFFLIAAIV ILGIVLSIVGIIMINIGEVK 204 cj0865 4 out 3 266 0 3 0.72 44,90,217,245 MSCIKMKDKCRNFSLSKWQD GESKNPNQNIASLNQVVLRY 205 cj0157c 4 out 2 135 9 7 16.07 29,62,94,132 MDQSYEFFLALHLYSLYASG CLILPFEIFLLFLPFLIERY 206 cj0399 4 out 2 190 5 1 5.26 22,48,92,134 VIEMNFYWFDAFILGFTLLL DHASEKLQDIVSDLNNTQKG 207 cj0277 4 out 1 249 1 3 1.74 24,149,171,211 MKNKIFYVLVLAFLVFISFY VEVKPYVKISIPAYLYVVDN 208 cj0651 4 out 1 164 3 8 3.52 47,93,131,157 MRRNLSAYKAKFNGAYVFLG AYIVSVFIECCLAYVFFKGK 209 cj1222c 4 out 1 396 2 1 2.08 29,87,176,336 MAKKVIRQILLIYLTTTGIF NDIKIICESVENQGSVFKLN