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Transmembrane helices for camje (Campylobacter jejuni)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
116cj1587c6in108|ali|phd|phdHtm|54381-8.1836,66,132,161,255,281MPFIMELLKQNKLKLISFLL
117cj09016in31|ali|phd|phdHtm|24785-8.6224,74,110,132,197,234LNQKNIRIFVFFVIIILWGY
118cj05016in18|ali|phd|phdHtm|24694-9.3948,103,129,167,201,230VYFASFAYNSNFGNVYSGMV
119cj0578c6in11|ali|phd|phdHtm|24594-9.9937,88,132,176,206,229MFEELRPHLIELRKRLFISV
120cj06146in10|ali|phd|phdHtm|30495-10.7333,95,140,171,224,292LLKEKIIKFALFLCAFVSVI
121cj1583c6in9|ali|phd|phdHtm|31494-11.1325,115,154,195,255,299VLKRLVFSIFIAFFSTFLCF
122cj1163c6in6|ali|phd|phdHtm|31632-3.2364,89,127,160,209,231MYKFLSHEPLANKSCHHNHE
123cj0593c6in5|ali|phd|phdHtm|21033-3.5250,87,109,136,169,194MEINALTITTLYIIGISAEG
124cj06766in4|ali|phd|phdHtm|28920-2.2718,86,110,150,215,263MGIIFIISLLLIYFSEKMSN
125cj10686in4|ali|phd|phdHtm|36870-7.6029,51,136,310,332,359MRSLLLLIVILILGIKFYSI
126cj1114c6in4|ali|phd|phdHtm|24294-9.0641,104,147,175,207,230MNNRPQLIYILPNLFTAASA
127cj1119c6in4|ali|phd|phdHtm|29792-10.1466,149,175,212,258,287MYIKDIQRFEDNRYRARAYM
128cj1212c6in4|ali|phd|phdHtm|26875-7.1446,103,143,180,211,243VKNFFTILLNLRDKEILNYA
129cj0378c6in3|ali|phd|phdHtm|17993-15.2628,52,87,120,149,171MQTKYFKFLAYFSFIISLIY
130cj1003c6in3|ali|phd|phdHtm|17292-13.4523,63,92,125,149,171LLTIFLIFLNILCYFLISYD
131cj0948c6in2|ali|phd|phdHtm|29571-7.1236,58,96,131,166,190MSLQKKATLVASLCAIVLAL
132cj00336in1|ali|phd|phdHtm|59341-4.86389,432,485,511,535,579MEELTKEQRQIIEEEIKKEI
133cj0199c6in1|ali|phd|phdHtm|37341-4.2225,56,99,153,181,274MKKWIFIVFCFILGFIIHIF
134cj03136in1|ali|phd|phdHtm|35203-0.8229,72,117,294,320,344MWIFFRFISGIYLKNFFIIF
135cj05526in1|ali|phd|phdHtm|23591-14.7030,75,115,137,183,215LWRWLMEWLLLASIPLIVLG
136cj12106in1|ali|phd|phdHtm|18593-9.7731,62,104,133,155,179MQDMIDTLIKYGYIVLFFYS
137cj1470c6in1|ali|phd|phdHtm|27971-7.6777,99,180,207,231,272MKFYEVEFLKNNQNYTKTIK
138cj1493c6in1|ali|phd|phdHtm|21914-1.8421,69,98,151,184,212VSIDFLAIISVAFLSSFGHC
139cj04676out23|ali|phd|phdHtm|233202.4840,75,121,158,183,221MDFDFILAQAPAFLTAAWLT
140cj0882c6out19|ali|phd|phdHtm|724102.0055,94,143,232,272,324MAKNKIVDLVFPFLGPLIAP
141cj0301c6out16|ali|phd|phdHtm|224424.3732,66,107,162,184,214VLDPAFLQTLYLTFKLAFIT
142cj07826out15|ali|phd|phdHtm|260414.8531,55,79,136,170,192VMKYLIARRIVQLGILALFS
143cj0369c6out12|ali|phd|phdHtm|458838.6432,69,98,146,184,322MQGHITNYTKKRYFVYLIAS
144cj02386out9|ali|phd|phdHtm|627707.32266,313,346,390,412,434MKKIIFSLCFFILHLGAQEF
145cj0167c6out3|ali|phd|phdHtm|2039512.9434,73,96,142,164,197LIIISSSIFYKILGFVMDFY
146cj02056out3|ali|phd|phdHtm|267343.1069,114,158,190,230,256MENLYALILGIIEGLTEFLP
147cj1111c6out3|ali|phd|phdHtm|2149513.4629,72,97,144,173,204LIVFSSMGSELYLMFFAAIT
148cj1049c6out2|ali|phd|phdHtm|1999412.2128,66,88,138,166,190MFDSFLSGVFLGFGVSVPFG
149cj1130c5in219|ali|phd|phdHtm|56810-1.5945,96,184,281,308LGKTVLKKLFFILSKEDKNF
150cj0357c5in11|ali|phd|phdHtm|20297-10.3120,76,103,140,179MENLIIYAFIYLLGSIPFGL
151cj01825in4|ali|phd|phdHtm|40274-7.3237,153,218,263,351VMIMFSSFFKSKKWALWAYL
152cj02565in4|ali|phd|phdHtm|51291-9.5426,65,87,129,162MLRLTWFQFTFFNSLMIVLL
153cj13915in3|ali|phd|phdHtm|17819-1.8956,94,127,151,176MVISTFVAIIFEMIRYKSVV
154cj04085in2|ali|phd|phdHtm|26094-13.3150,96,145,185,230MRELIEGYLGKSIEGKKSKM
155cj0017c5in1|ali|phd|phdHtm|50890-12.0533,68,90,131,173MNEINKTKNFYTLMCLAGFL
156cj0987c5in1|ali|phd|phdHtm|32192-14.7433,68,233,278,308MEKSLLFHFRRIGVEFIIFS
157cj1055c5in1|ali|phd|phdHtm|65791-9.8724,73,108,168,200MRKILLQIFIFSVLFIATFA
158cj1204c5out65|ali|phd|phdHtm|226555.1636,96,122,159,209MKDLFLFSSLLDASHTFSYF
159cj0919c5out25|ali|phd|phdHtm|219868.7440,74,102,154,206MENVFNAQNIEFLMQGLFLT
160cj0920c5out25|ali|phd|phdHtm|2509510.9967,107,132,196,234MNESVGFVEHLRQILTSWGL
161cj04685out21|ali|phd|phdHtm|218959.4741,74,103,166,207MLELLNTDTLLRLWQGLFVT
162cj1168c5out9|ali|phd|phdHtm|200878.1743,70,131,158,189MQEIISFIVETASAWGYLGI
163cj1092c5out5|ali|phd|phdHtm|323040.2838,157,195,257,284MQFFSEKKIYDFMRMRFAAI
164cj1165c5out3|ali|phd|phdHtm|1649114.8423,48,71,104,148MIEFILRDMFFAAVAGFGFA
165cj1276c5out1|ali|phd|phdHtm|268030.2328,166,196,222,260MKFFKTHLSLILPLLFMMFA
166cj1412c5out1|ali|phd|phdHtm|373505.84106,132,161,183,257MDREVFYIAGYDPKSYRFYY
167cj1509c5out1|ali|phd|phdHtm|310949.3175,118,155,214,256MRKVFVTLLLSVVSLFAYGS
168cj1539c5out1|ali|phd|phdHtm|2399611.4662,94,129,180,231MLKLLILKRIFLDYIFDGFK
169cj15605out1|ali|phd|phdHtm|2139014.8027,115,155,177,210MLFVTFGLKLSLIYVVFLIF
170cj0820c4in19|ali|phd|phdHtm|24415-1.9167,103,200,229LKKILLFLLLSMSLFAAEAT
171cj1570c4in15|ali|phd|phdHtm|17298-10.5935,73,112,159MIENLAFVFFSVVVLGFFGI
172cj16284in13|ali|phd|phdHtm|16654-5.6922,52,106,145LILIINLFFIQYNLLKFISI
173cj03354in11|ali|phd|phdHtm|36293-12.6052,107,164,207MAGEDQEKTEEPTSKKIEDA
174cj0337c4in9|ali|phd|phdHtm|25893-11.2125,49,170,200MDLSTILGMVLAVTSISVGD
175cj03614in9|ali|phd|phdHtm|15693-20.8827,77,104,141MAKTFKFIFYFWGAFVLVFA
176cj11744in8|ali|phd|phdHtm|10229-2.0619,49,75,98MYIFIIVLSALLDIVANLLL
177cj0958c4in7|ali|phd|phdHtm|52890-11.0729,351,424,501VNNSNNIFQQKRILLAVVIS
178cj10674in7|ali|phd|phdHtm|17850-5.5937,59,102,162MNLPNILAIFRMVLAPLLFF
179cj1265c4in7|ali|phd|phdHtm|23895-11.2848,91,157,211MSIYKEAFMQNKEEKLQRKA
180cj0309c4in6|ali|phd|phdHtm|10466-6.2020,50,77,99MEWFYLFLATACEIFGVVIM
181cj0310c4in5|ali|phd|phdHtm|12409-0.9639,65,91,113LFYKYYVNLRLHVNEKFNIN
182cj0721c4in4|ali|phd|phdHtm|15668-6.3227,70,108,147LKAVNLFLLASIIGVELILG
183cj1093c4in4|ali|phd|phdHtm|52652-5.01387,416,476,498MRNSKINYRLIIFIAVFIFG
184cj1120c4in4|ali|phd|phdHtm|59091-21.4332,63,98,123MIFYKSKRLAFFLTSDIVLI
185cj0341c4in3|ali|phd|phdHtm|14793-14.1726,54,113,138MFDFLYNDISYLGLFMVCFL
186cj05174in3|ali|phd|phdHtm|12232-3.3731,55,84,118LLNTLLVVGFGGFIGAILRM
187cj0654c4in3|ali|phd|phdHtm|15297-13.6435,65,99,139LDIFREKNIYFSSIGKFTLG
188cj13894in3|ali|phd|phdHtm|15995-14.1119,43,97,140MLGIVFSLFSVFLLVFMLYK
189cj1122c4in2|ali|phd|phdHtm|20231-3.9740,90,128,150LHFNNNLVVHYIVNPSPLGW
190cj05694in1|ali|phd|phdHtm|28901-0.8859,97,174,245LENKFKINYDQTTTNGRNGT
191cj05984in1|ali|phd|phdHtm|48092-11.8245,72,151,193MDIKSDEISELVLPEGKDAR
192cj08464in1|ali|phd|phdHtm|37491-17.9719,54,96,128MIFLIFSFIVLLIFGLANVY
193cj0851c4in1|ali|phd|phdHtm|16797-11.8127,51,126,158MEHKKALFCIFAIIHLFFWI
194cj09284in1|ali|phd|phdHtm|19897-13.3041,65,150,181MEEFLKNLLYQYKDLAYIII
195cj0941c4in1|ali|phd|phdHtm|40163-6.3045,289,345,384LNKSVLKYLLFKYLRFDKEQ
196cj14524in1|ali|phd|phdHtm|23773-7.4936,88,152,224LDILKLAIKDFLSLKFLKFA
197cj1474c4in1|ali|phd|phdHtm|47210-1.0319,117,352,457MIRLILILINILFCHYLYAL
198cj16614in1|ali|phd|phdHtm|43083-8.4038,323,373,412MMLAKMIFNSIFKNKIQKFL
199cj16624in1|ali|phd|phdHtm|37294-9.8742,268,322,356MVDKFFLNELFKSISFSYQR
200cj08034out208|ali|phd|phdHtm|580111.0641,82,171,270MHNEMNLKEVLIRFKPFYKR
201cj01834out14|ali|phd|phdHtm|452919.2642,100,138,176LDPSQVLDLNQTSTASFDAG
202cj08304out14|ali|phd|phdHtm|1389511.1130,60,99,133MEEFYPYTLTIHLLCAILFI
203cj11734out6|ali|phd|phdHtm|113191.7229,56,81,105LNIAKKELFVAWFFLIAAIV
204cj08654out3|ali|phd|phdHtm|266030.7244,90,217,245MSCIKMKDKCRNFSLSKWQD
205cj0157c4out2|ali|phd|phdHtm|1359716.0729,62,94,132MDQSYEFFLALHLYSLYASG
206cj03994out2|ali|phd|phdHtm|190515.2622,48,92,134VIEMNFYWFDAFILGFTLLL
207cj02774out1|ali|phd|phdHtm|249131.7424,149,171,211MKNKIFYVLVLAFLVFISFY
208cj06514out1|ali|phd|phdHtm|164383.5247,93,131,157MRRNLSAYKAKFNGAYVFLG
209cj1222c4out1|ali|phd|phdHtm|396212.0829,87,176,336MAKKVIRQILLIYLTTTGIF

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