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Transmembrane helices for camje (Campylobacter jejuni)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
317cj04901in85|ali|phd|phdHtm|39333-3.0580MQEQGKTRVLASIEINFTAD
318cj08561in16|ali|phd|phdHtm|28294-15.0830MEILKKLYKFSQSWTGTVVI
319cj1537c1in16|ali|phd|phdHtm|65722-2.24163MLNQNNQELFKPSKEFSRNA
320cj16651in14|ali|phd|phdHtm|16796-10.8823MGIFRIQAYFFALIIALFFV
321cj0037c1in13|ali|phd|phdHtm|34793-15.28192MKKHILLLGLCLSLSLSAKS
322cj16291in12|ali|phd|phdHtm|12919-1.7333MLKLPKNEGLNIVPFIDIML
323cj0834c1in11|ali|phd|phdHtm|43992-18.9244MRLKISNLKINSNLILNNKI
324cj08121in9|ali|phd|phdHtm|47052-5.96233VKLVESRNVNNVSSFKEALI
325cj1667c1in6|ali|phd|phdHtm|5079-7.8334MKKHSKYKIYLNFKLFKLKI
326cj0059c1in4|ali|phd|phdHtm|28005-0.5168MINDFLKMFTNECISTIEGL
327cj0336c1in4|ali|phd|phdHtm|24795-10.3040MAKKHKCPECPAGEKWAVPY
328cj06781in4|ali|phd|phdHtm|13629-2.2028VICLETLLSFFVVMLILCTL
329cj1358c1in4|ali|phd|phdHtm|17197-22.0733MIILRRKILKKTSNLFTIFL
330cj0397c1in3|ali|phd|phdHtm|19225-2.7154LGLKDNLKAVKNELNTEEQF
331cj04721in3|ali|phd|phdHtm|5999-23.3354MEKLITYFKLSKAELRKVIF
332cj0658c1in3|ali|phd|phdHtm|6449-4.4546VTKQEIQKLDTNFLGHRKPL
333cj13781in3|ali|phd|phdHtm|44042-4.00153MNKFRTFPQINTLIEDESLK
334cj15251in3|ali|phd|phdHtm|4569-6.0937LLIFAFYITGTPIPKAPSRE
335cj00461in2|ali|phd|phdHtm|5709-0.9846LQLCFGLYLLLVGLEDNSWH
336cj04041in2|ali|phd|phdHtm|27894-23.0844MENQKNEFDDIILEKSNKSE
337cj0525c1in2|ali|phd|phdHtm|60272-7.4332MQEYKKNRVSKVAFAYCMAL
338cj06331in2|ali|phd|phdHtm|36093-21.3330LSKKKLVQIQRYLIIAILFL
339cj09111in2|ali|phd|phdHtm|18697-30.6823MKKNIILFIVIVAIILGVIF
340cj1190c1in2|ali|phd|phdHtm|47434-3.4353LIYDFKKFSIKRGKFMVKNG
341cj00671in1|ali|phd|phdHtm|51843-4.00112MSIACCIDNNSINCSKAFLN
342cj0084c1in1|ali|phd|phdHtm|3699-20.5935MIKRCPKMGKLQYFEKIYTY
343cj01111in1|ali|phd|phdHtm|25945-4.3330MKNYGLSNLNSFLLALAIYI
344cj0152c1in1|ali|phd|phdHtm|31264-6.00115MLNWKKIQELNLKEVAAKTQ
345cj0268c1in1|ali|phd|phdHtm|36254-5.9563MPADLNDYFNKKNGNSNNNG
346cj0455c1in1|ali|phd|phdHtm|11469-6.6741MTYSFIQPRKKPIFTLFDKI
347cj05071in1|ali|phd|phdHtm|18386-8.00115MLILASSSISRANLLKTAKI
348cj0529c1in1|ali|phd|phdHtm|36204-0.2070VIFFARTINFLSNLIYNCSN
349cj05301in1|ali|phd|phdHtm|85691-13.3328MKKKILYIVVFFVVLILALF
350cj0660c1in1|ali|phd|phdHtm|36844-4.00225MMKINSLNKINFIKSTDLLY
351cj0666c1in1|ali|phd|phdHtm|4299-11.9039LEQNLLTPLLYFFKKIASKN
352cj06941in1|ali|phd|phdHtm|49662-6.2932MLTWMQHHKKYLVVTIWVST
353cj07381in1|ali|phd|phdHtm|5439-3.0351VTVNDLVINTAVNTKVGGII
354cj0776c1in1|ali|phd|phdHtm|34084-8.0023MNLKIFSIIVGILIAVIVIL
355cj07781in1|ali|phd|phdHtm|26754-5.0539LQGRVNYRLIQFPLYYQRKV
356cj08231in1|ali|phd|phdHtm|20556-5.37164MSMINSTLPIQMKVLAKSGY
357cj0892c1in1|ali|phd|phdHtm|16299-17.0027MKKYITISILSILLLILLAV
358cj0907c1in1|ali|phd|phdHtm|3899-28.5737MPKKDIPIKKFLIIIDNLLK
359cj09101in1|ali|phd|phdHtm|15099-24.0023MRKIIFILAFAFVIAILYII
360cj10391in1|ali|phd|phdHtm|34283-8.00116MTIALTGGGTGGHLAIVRCL
361cj10791in1|ali|phd|phdHtm|15097-36.0023VKKAYVLIWTIFLILLISLW
362cj1158c1in1|ali|phd|phdHtm|7529-2.6741MFKARNLDAQSFHNAKIFWD
363cj1160c1in1|ali|phd|phdHtm|5999-9.9732MQQKCFCISKMIRFSKIIIL
364cj12081in1|ali|phd|phdHtm|20875-7.7854MEKTDFRALQKIRLFKHSKL
365cj1367c1in1|ali|phd|phdHtm|78231-4.00649LLNKELEIFKKNLSSYTQSC
366cj14081in1|ali|phd|phdHtm|17828-2.0039MDEELENEETKKKKGGSLVI
367cj1483c1in1|ali|phd|phdHtm|17397-13.3831MLETKKSFWPYGILLSLLAI
368cj1485c1in1|ali|phd|phdHtm|3399-10.0028MSKALEYLIVIGLVAAAAIT
369cj16211in1|ali|phd|phdHtm|25044-4.2925MLAFFKGLGVGFLCLLLFVA
370cj16481in1|ali|phd|phdHtm|29624-2.0028VENRANYFFVGLFVFGVFFA
371cj1723c1in1|ali|phd|phdHtm|8599-9.5236LHLLKHFKEEEMKVKFIPVI
372cj1728c1in1|ali|phd|phdHtm|5149-4.7637LFFAPFKGASLALQAYLGSL
373cj01101out15|ali|phd|phdHtm|129797.8733MPFDDEKPELNITPLVDIML
374cj01801out15|ali|phd|phdHtm|136090.7738MIKTEMAHKEEELSEINITP
375cj16411out13|ali|phd|phdHtm|427727.80259VKLKLENSFITDNTLECEKE
376cj0197c1out12|ali|phd|phdHtm|242343.32113MIKIGIYGAKGRMGKQIEEC
377cj0328c1out10|ali|phd|phdHtm|330838.80130MNLGNTMLKASLKSIASYIP
378cj13031out10|ali|phd|phdHtm|353636.28134MKTRFDKAKISGICVSVPEH
379cj01031out8|ali|phd|phdHtm|1709719.7546MSKLFFIIFLLPLYAFGASN
380cj1504c1out7|ali|phd|phdHtm|308737.3167MQKTPALLSDIGNNEDASVY
381cj0231c1out5|ali|phd|phdHtm|340636.60196MQRKRIYNPSSNETLGDRKV
382cj06741out4|ali|phd|phdHtm|739913.0053LNLNTVISFITNTNLQHYSG
383cj06751out4|ali|phd|phdHtm|105595.5867VLTLENKFQSIATGPVAALE
384cj09891out4|ali|phd|phdHtm|85393.6537LKYLNDIFQNLVLKRKNMEF
385cj1020c1unk3|ali|phd|phdHtm|144070.0021MIARWLFISSIFVVALFGIN
386cj1128c1out3|ali|phd|phdHtm|309151.00293MPKLSVIVPTFNRQVLLEKA
387cj1203c1out3|ali|phd|phdHtm|63999.3240LIYILEFFKGASLALMLFGA
388cj15581out3|ali|phd|phdHtm|579911.6929MQSFLNTFKEFLYLFTELSV
389cj00321out2|ali|phd|phdHtm|386828.60302GGGVLSYITSNKYTRAGYGE
390cj05201unk2|ali|phd|phdHtm|146090.0020LLMLGIYLLIAALSFLALYF
391cj05881out2|ali|phd|phdHtm|253656.04180MRFDFFVSKRLNISRNKALE
392cj1012c1unk2|ali|phd|phdHtm|149090.0019LVIFCAALALLLFLGVIAYL
393cj1087c1out2|ali|phd|phdHtm|300858.0045VVKNKFTITITDINGSRHFY
394cj11361out2|ali|phd|phdHtm|3909312.00253MKKVGVVIPIYNVEKYLKEC
395cj1154c1unk2|ali|phd|phdHtm|68090.0021MNSIIMMMIGVSILAFFIIL
396cj1343c1out2|ali|phd|phdHtm|171060.6126MKKAFTILELVFVIVILGIL
397cj00471unk1|ali|phd|phdHtm|31090.0023VISIIVARGVIKTGLGEHLA
398cj00831unk1|ali|phd|phdHtm|34090.0020MLHALFLLAWPLVIYLSYKF
399cj0201c1out1|ali|phd|phdHtm|219393.0045MIIIKAAMFFLLKKIENGLF
400cj02421out1|ali|phd|phdHtm|369918.8931LRADYNAIILKILLINYIKI
401cj0290c1out1|ali|phd|phdHtm|379928.3328VDYYGSWNAGLIMLLSACIL
402cj03441out1|ali|phd|phdHtm|49090.6838LVTLSIVKMFQNIIKYKDFI
403cj03901out1|ali|phd|phdHtm|820010.00110MAEQEDIILEKPEDGLNQPR
404cj0457c1out1|ali|phd|phdHtm|2169516.9129MQSVWFYMGKSFKIHCLTYI
405cj04941out1|ali|phd|phdHtm|649914.2929VSSNLAVDTILWGVIMIKIA
406cj05021out1|ali|phd|phdHtm|75191.4965LHGIGGVCEGIATGLFASVK
407cj05681out1|ali|phd|phdHtm|93696.2851LITYSNLSDVKKRIEDEFTH
408cj05991out1|ali|phd|phdHtm|317444.2436MKNESKEDSNFWIAYADLMA
409cj0610c1out1|ali|phd|phdHtm|336848.0022MSVVRFFFILIIVLGLVVVV
410cj0692c1out1|ali|phd|phdHtm|312545.39266MLEDDFIKERQNIRQKMLKF
411cj07461out1|ali|phd|phdHtm|48595.8831LLDLLLYGSVEIVFVWVIEI
412cj07541out1|ali|phd|phdHtm|489930.1639LFKKINFETNFTEKNNNQII
413cj0877c1out1|ali|phd|phdHtm|309921.4323LQDFIIAKKLYFCFKYISSI
414cj0900c1out1|ali|phd|phdHtm|599910.5432VLEFPKNKVVFMEILDFILI
415cj1060c1out1|ali|phd|phdHtm|369933.7526MLENPIPNSIIITTIAVVLA
416cj10991out1|ali|phd|phdHtm|573828.00507MLEWDLSALFHDKEALQNFT
num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
417cj1159c1out1|ali|phd|phdHtm|40999.0929MAITSPVIYHIGYIAIILFE
418cj1256c1unk1|ali|phd|phdHtm|220060.0021MEMILFVLVMILLVLLFVVL
419cj14671out1|ali|phd|phdHtm|254747.5058MKNFIHLKAKLDFLANQKNT
420cj1486c1out1|ali|phd|phdHtm|739914.8132MMENNNRCVFSLSGVTGMLI
421cj1489c1out1|ali|phd|phdHtm|221050.8927MFSWLEKNPFFFAVAVFVVI
422cj1637c1out1|ali|phd|phdHtm|3289416.3131MDFFFVEYRDPLVGLIILTI
423cj1671c1unk1|ali|phd|phdHtm|67090.0018MIFWAFLVVIGAIYFGNMFF
424cj17141out1|ali|phd|phdHtm|329933.3323MTMLDIFEIIFITTVVIIGF

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