--- -------------------------------------------------------------------------------- --- --- All proteins with at least 3 transmembrane helices in C. elegans --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 38 CE02181 3 in 64 333 3 0 -3.58 44,145,265 MASTIKEVFAEIAAPVENSH EVQKLHNSAKALLEVQNGIV 39 CE04747 3 in 28 2338 0 0 -0.10 75,2184,2338 MLRSLGILCLLGAALAAPSR TSSVLSVSFSMFIVLITKFL 40 CE18131 3 in 22 374 1 1 -1.67 119,303,364 MEKLKEGGRQITAGGSAGLV PGGAVMLIVYDEVYSWLQKN 41 CE11342 3 in 19 2153 1 0 -1.02 1983,2090,2151 MRLGIFLLALAGCCSFASAK SSITFSILALFAAVYIALTR 42 CE14684 3 in 19 126 4 1 -4.40 31,56,83 MKRNFRVCKNIVFLSLRILE ITDITMDIMEDIKKDFTVVI 43 CE18178 3 in 12 268 1 0 -1.94 23,59,129 MMFLKCSLFIIVMSVQIANS EDYVKLWIQGDIQILNVTMS 44 CE09225 3 in 9 499 0 0 -0.22 23,166,189 MRHLRRTFVLTACLLIYVMV PVTYYYATDPYFSDEMGCYA 45 CE15956 3 in 6 272 6 0 -6.48 20,42,225 MMTFFLPLIAILFTSQLNAV TSTMYTQAAKKASCATTCKI 46 CE09292 3 in 5 398 4 0 -4.74 291,352,379 MIVVSRVEKTGIAYSYPPST VSNKFIEKLTTKIYNFNELS 47 CE13213 3 in 4 249 5 1 -5.41 18,54,77 MIAIISILFASFLAPEVSAA TNNFYTVDQRRARCGSTCRI 48 CE11796 3 in 3 428 7 0 -7.12 178,273,303 MTNYASIANFKTEESVLVRE NSKENSSQKVQKQNQKINGI 49 CE20219 3 in 3 219 9 1 -9.71 22,44,96 MPLGLLTEPPIHFFWFFLFF RKHEYLRFGKRKHEYLRFGR 50 CE24044 3 in 3 1251 7 0 -8.00 87,177,292 MALRKVRSNIDRIFDKSLTD AGDEQLIQSIIQDVSEICAR 51 CE05520 3 in 2 268 3 0 -3.28 40,62,168 MKISTILLKRLNKLEDVSKL ILKQYYEMGISDADIFIKKN 52 CE12936 3 in 2 198 9 0 -13.57 27,91,139 MKNNSHLIGFVILICYDGAM KKSFSSGKNSVLLVIKRSNT 53 CE14486 3 in 2 1208 3 0 -3.84 194,236,755 MLLRNSFISQDENDDQLSPT HLLRVPMRVSMKTGRSWADL 54 CE00203 3 in 1 397 9 0 -12.00 85,123,397 MQWPLIAALFTQLYHFVIGD FDFNLNLSFLFYLLIFQKLF 55 CE01768 3 in 1 261 3 1 -3.29 177,207,244 MYLTFIQFLVNQSTSEALKV LSITNKSIEALRADAELAIP 56 CE03361 3 in 1 327 2 1 -2.70 28,108,173 MGKYCKILVPSLKNIFICVL GKFNFQFKNGTCNVDVYRNA 57 CE03607 3 in 1 2692 1 0 -1.03 1462,1520,1664 MEKIRSPSLIEDLLPEDELN ELYKNLGCTPPTKTWRFKIR 58 CE06351 3 in 1 456 6 0 -6.13 146,180,316 MPSTRCAHQMSTKKKAERVD EMIYKLKSDPTERKRRSNTV 59 CE06651 3 in 1 327 1 0 -1.10 30,195,271 MPRQRRTRNRLIISFIFMMC TYRVTMNSRKYQKIQLNLPK 60 CE06786 3 in 1 192 9 0 -14.99 85,128,178 MSTVIMLTYLKYKWLDRREN ILWTITNNCPHRTTIHLGMF 61 CE06946 3 in 1 290 7 1 -7.50 22,258,280 MRQEIMLAIFITILFISTVI KELIILSVQGLEILFTQFQT 62 CE07778 3 in 1 392 5 9 -5.76 18,223,383 MTFLSIFLISGLFLCGSAQK VSMAISTMYWLSQLHFKMKH 63 CE09129 3 in 1 399 7 0 -7.03 33,153,309 MANHRLTDKLTMRSCFRWIL KFIRTFMINVGDEKCRNSLL 64 CE13756 3 in 1 289 9 3 -15.56 32,118,175 MRLGTFIFLSILFFKCHSSK YMIGNKKKSRYVIEKISPIP 65 CE15453 3 in 1 356 4 1 -4.67 165,231,356 MFAFLTIKAITDSMSRLTVT DKSSVTKRIFIPIILTIWTF 66 CE15481 3 in 1 328 0 0 -0.72 63,240,324 MIYRRFTVVSIFFPFRRTQI VALIHLDTLASKLVLQMFVL 67 CE15832 3 in 1 496 1 0 -1.56 18,64,123 MRFFILLLLTIFVASLSADD SLLNQWKNAKEIIIELTISA 68 CE16232 3 in 1 188 9 4 -17.93 21,54,119 MVTTLLCMVAVSIITIFENR LKISTQSVNNLVYITLSCLP 69 CE16240 3 in 1 497 0 0 -0.70 73,123,462 MTPSSVSLRISVSNLILEIF LFSGNFLNKIDHVLKEFKEY 70 CE16382 3 in 1 369 2 0 -2.33 48,147,244 MDALNWLFCNLFKRRQKQPK LNSAKFNCTYIDVSLNFVEI 71 CE16762 3 in 1 481 6 0 -6.01 57,215,296 MWFRLLLDVPWNYKANLMGL HTSCHSEVDHHILQNSFFKV 72 CE18120 3 in 1 597 2 0 -2.93 33,96,578 MELLVHQGGIVGFSGILWGV ALHRDFVEQFVHVVSECRMS 73 CE19331 3 in 1 487 2 1 -2.36 80,257,451 MKFSFDFLPVCLYFTIFYVY EMDNVTSWVYDKTQGLFITG 74 CE20262 3 in 1 377 3 0 -3.68 24,223,377 MKLSTAFLTFSAVFLYGSAQ TKSAGAVKLFTSVVTLLMYW 75 CE21623 3 in 1 293 0 2 -0.49 55,77,121 MTAENPLKNTNFAKNSSVER DTGHNNRNHRLHDKLRAHDT 76 CE23906 3 in 1 290 4 0 -4.16 18,139,209 MNTTLILYCYFLLLLLFYKT SNSIIKPASQVNRLKLKKFI 77 CE24308 3 in 1 129 8 4 -8.29 35,57,90 MAEKNKQFGHANKIKPNFFA EIAAHPRCSNPLLGILLPAK 78 CE24504 3 in 1 297 6 3 -6.59 168,230,262 MSNLPLDVIHKIVEKVEPIE DNGSHFSLLYDHISIKIEKK 79 CE24560 3 in 1 333 0 0 -0.25 38,60,93 MENSATSQFTHRQKLLALPV LHFTDVDVCRKVNKLYENGN 80 CE25330 3 in 1 382 1 0 -1.85 36,99,167 MKWLLACLDGNSCAENAVEI GSIEHTKAWSRASHAEALLK 81 CE25344 3 in 1 417 7 1 -7.71 33,96,149 MTFCQKKIFFRKSSFSSLSQ DFTVLSRCYVSDFVDILDYY 82 CE16783 3 out 98 499 4 0 4.62 18,188,464 MLIILILVAIAAVLTVNLWR TPFSPVKRPPVYDIRFISRA 83 CE02827 3 out 22 290 0 2 0.33 121,220,275 MAEDKTKRLGRWYFGGVAGA LTFIFFEQLRLKFGYAPPVK 84 CE23749 3 out 18 773 1 0 1.46 42,296,471 MNISVRDRRPHPPHLESRVC IREMSKIELGLQQVVSHFSE 85 CE03074 3 out 16 501 0 0 0.83 22,245,320 MAILIISTIFFTIITFISYS ETNGVIFRPRSPVRLNLKLR 86 CE05617 3 out 16 341 4 2 4.41 25,52,180 MYFDVANFCVWSFFSLVVII TAELGRDLSACLTHVDFEPE 87 CE04891 3 out 10 1652 8 0 8.00 836,990,1270 MGIFYGGNITFKKVPKVVIY KKVNKEKDLFLSYHQWRKEW 88 CE05749 3 out 8 650 4 1 4.49 34,157,311 MKLEELVTVMLLTVAVIAQN RNFVPFDNDLRCKVSLGSYP 89 CE25333 3 out 6 296 1 0 2.00 54,76,182 MQPDELELFVTPEEELRMQR GVGLMPGELAEQPVDSDDEI 90 CE02637 3 out 5 452 0 0 0.77 99,133,294 MFLEVANRFQKRMKFGWETS VKLSDQSTSSKLQDNIIFIA 91 CE03925 3 out 5 776 0 0 0.12 440,483,753 MESKVVALNRESRRWKKSSF MLGVHKHRVASYQAKNSRKN 92 CE11800 3 out 5 405 2 0 2.61 214,289,346 MFTLARVLNNIGSASSNEPI QESLRHVLANFIKFICKFVS 93 CE21565 3 out 5 284 0 1 0.52 100,140,183 MSLDSVSSFDFSSADFLAVI VSSVIFDFDSSLAVSGFSVT 94 CE17103 3 out 2 274 3 1 3.62 25,136,274 MKLINCISIALLCTLVDFSS DIKVLLCNKVLLFGQTIIYW 95 CE01152 3 out 1 481 4 0 4.28 285,393,459 MFLKRFSEKEKYQKKENEFI RTGILLNDLKTIPFRPKHIQ 96 CE01577 3 out 1 313 6 1 6.49 84,247,283 MSEVSYDILENPEPNSHLWK PNKGDLSKVFIAHNNSCHFD 97 CE04071 3 out 1 405 6 1 6.48 28,304,333 MSNGAATTRLINILPLVSII DARLLVDGRRRKSTKRQRVE 98 CE04996 3 out 1 483 0 1 0.90 31,135,157 MFSELKRYSVLSLYTCALFF TEVYSKPQQYNKAAHSRRAQ 99 CE06144 3 out 1 334 0 0 0.70 31,181,282 MSEKSLQSKMLSTVFLLATL YQTFGNYTQGFEVDILTTKN 100 CE06461 3 out 1 524 0 0 0.55 193,220,433 MGDEFRPSHEERSKMYKSNV NIDDTIEKMIREPIMDQPFS 101 CE06624 3 out 1 147 1 2 1.91 44,91,113 MVAVMLPTARKPTEHKTPSA TAVYQILPLVDEKKFREQEM 102 CE06840 3 out 1 409 0 2 0.73 27,62,309 MIFFSFRNHLILPTLNIFMC LLMLNEFQDYKKYHSKLGSY 103 CE08659 3 out 1 461 5 0 5.23 58,307,338 MVSETNLQLFFNMHLVIILN VAEEKVAGTKDRTLSSVSST 104 CE09653 3 out 1 471 7 0 7.25 344,402,432 MACLRKLKEDIQVLEKLFPK LQPPPIPFQLIPPFLNRTKH 105 CE09917 3 out 1 361 1 1 1.67 65,130,348 MFFITLILDFLTYTSISAEN NHYSGIAVTLDTSLTRKIFF 106 CE10030 3 out 1 465 1 1 1.73 253,312,445 METETQCKRASLMSESSSNL LAYRGGRAIFNRVSTFIESR 107 CE11374 3 out 1 253 7 1 7.25 159,191,222 MATIPFSILRLPEPALHKSI TVDKRSYAPPRSIPCNIYPL 108 CE13696 3 out 1 407 9 1 9.80 25,198,352 MKSIHPYWFKICCLVFIIFL GSRGSKKARKKSTDPYAALQ 109 CE14317 3 out 1 445 8 0 8.74 56,221,277 MSANKPPGQLQILHLPQPNE AGGFFKDVLNTAERFNFTYG 110 CE14940 3 out 1 313 1 0 1.54 18,152,222 MPFLFVLISINVLSVSLVLV SKVLSSSHSPASDGIKSNKA 111 CE15255 3 out 1 253 6 0 6.23 33,65,131 MAIIRACGEYQRFAAFSVGA TTEAPTEVKNEDDFLNKKLL 112 CE16222 3 out 1 408 5 2 5.29 168,259,320 MLSTNISIMDYYLHRENVEL VLQEILKGLSTGCWSKEGSE 113 CE16271 3 out 1 397 0 0 0.44 36,307,345 MHSVTLSSHLLTLFNSNAAS RINGLDNNKCCEICNLYPLE 114 CE17618 3 out 1 349 5 0 5.60 120,173,195 MKTLNCKGSDECNDDERNCA KTESVCSKNYSKEFHDVSFC 115 CE17681 3 out 1 779 6 0 6.89 596,750,779 MNEKELADSVFGGLMAKAMG EFPHFFPTNVFLFVLIPYFS 116 CE18447 3 out 1 435 6 0 6.00 21,102,331 MKFLSILFTVSALFMCGSAQ ADTSRTNSTLPDSTWTYPDD 117 CE19372 3 out 1 469 2 0 2.97 330,357,456 MENENLNNANKFMILKTHLL QRVCAAGLTARALLARPNSL 118 CE20599 3 out 1 1584 1 0 1.33 132,327,643 MEIWKRNQLGNPSPRGRVVL DHPLERPTKLDPSSDAVEAH 119 CE20600 3 out 1 1586 1 0 1.33 132,327,643 MEIWKRNQLGNPSPRGRVVL DHPLERPTKLDPSSDAVEAH 120 CE20719 3 out 1 432 4 0 4.42 158,225,285 MKPMRLHHQINVPESYPQSV AQCKKNFKDPSLATVEDMMS 121 CE22023 3 out 1 488 1 0 1.33 240,413,463 MSLSRIYRNQFTPVGDNSSN NLFHSRRREKQTFVEGGECN 122 CE22337 3 out 1 371 0 0 0.64 37,148,277 MLTVEGYFLHIFLGSWLFST CMLKMPENFSNIHHACQKKI 123 CE24282 3 out 1 266 9 0 18.30 136,183,262 MHNVLYSIRNIKKNQISRFR FWVDFLKIKIVIIKIYSMEK 124 CE25210 3 out 1 339 5 1 5.24 65,162,262 MATLDHLLEELFEACSVFDK FFNAIFMKIKKKKNKKYSKI 125 CE25299 3 out 1 392 2 0 2.78 265,340,392 METLKFEYLKIEFFGIRTPL PSAAPHEFQLICFIIAFLLV