--- -------------------------------------------------------------------------------- --- --- All proteins with at least 10 transmembrane helices in Borrelia burgdorferi --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 1 BB0724 13 in 5 443 4 1 -4.91 31,62,94,150,172,206,245,273,300,322,360,395,420 MYDMLKFEFSDRFLLFSYFV FVSRKSRFEEFTRPRQDILV 2 BB0843 13 in 3 482 9 2 -10.11 32,103,144,176,201,225,294,319,351,394,416,452,478 MKLFRRNVMIKMPSSFTIIF LFMIEFFISILVIIANIYLS 3 BB0604 13 out 8 500 2 0 2.54 35,79,130,159,201,230,255,298,345,381,412,474,499 MNSYDFITALVPIILIIIGL SKTIIYALYYILATGLLVYL 4 BB0140 13 out 2 1036 0 0 0.22 28,365,392,414,460,492,538,561,891,919,943,992,1026 MLVKRIVGKPITMLILFSLL LTLFFIPMLFEIFPTCFKFQ 5 BB0810 13 out 2 512 5 0 5.90 34,116,155,189,214,251,288,334,376,409,431,459,497 MKRKISMNKYVVSTILVMIS FICYSVLGINKLFRYIRRDA 6 BB0638 12 in 2 462 4 2 -4.69 38,69,102,142,179,227,269,291,315,364,405,448 MERDLKLERETNVVPNFWGL DIKLIFKSFLKIVTKLKSFK 7 BB0473 12 in 1 454 7 2 -7.67 38,77,123,160,189,218,268,299,343,369,408,443 MSTDKSKTRELILNGNLYKV ILIAFTCTRYWVKPILIKKY 8 BB0583 12 in 1 449 9 2 -11.75 43,75,117,152,190,216,263,299,339,374,404,430 MIKKFKNYDQIIKELFVIAI FIIIEFFHDDWIREIEYEEL 9 BB0584 12 in 1 448 9 3 -10.42 43,78,121,161,190,219,262,299,340,369,396,425 MEKFMYSLGVSKKDKIYKDL DAIKLVVSLPYFYSERWIKS 10 BB0116 11 in 23 574 2 0 -2.24 48,89,119,164,206,243,313,346,369,391,422 MLKLALERLSMINFIKIINF KKLEKQGKSGKTYKLSELEE 11 BB0719 11 in 15 459 2 2 -2.39 48,85,111,143,177,213,259,287,387,417,448 MQIKVMKIFLKVIGRGILGR TITFFLAMSFYFNIESIVAM 12 BB0814 11 in 4 444 5 2 -5.39 33,63,113,146,176,225,263,305,364,387,428 MLLNKYFLANRNINFIVMAL FVSIFTFLVVNFFCKKNSKV 13 BB0401 11 in 1 400 1 2 -1.30 29,53,91,147,189,227,253,299,323,346,386 MNIKINFFFTLPIGIFLGLF FNIAIIHIINFKELKDQEKI 14 BB0637 11 in 1 449 2 3 -2.04 41,63,95,143,171,214,272,321,362,404,433 MYMENIEVRGQPNFFGLIPF FVILSILGLDIKKVFLFFLK 15 BB0729 11 out 5 463 9 2 10.33 25,54,95,134,204,248,285,310,368,397,419 MDKISILYTLINIIIMLILI SAKQLKQFNHNIYNQKELVN 16 BB0447 11 out 1 701 3 0 3.98 51,76,118,164,186,218,250,294,335,370,425 MNKKIFYITILLHLPNLLFS LYKKEILNAKTDKEIYNIIV 17 BB0498 10 in 44 434 9 2 -11.74 36,88,135,162,195,230,280,321,379,407 MKELFLSLFTVKDLRNKFLF YLKTQGFSHGNKKNYAFLQK 18 BB0645 10 in 30 514 4 0 -4.46 34,80,108,150,191,228,299,329,351,405 MLKGFEQAQKFGRSFMLPIA QVVYGPGVSVLKNEIEELLE 19 BB0303 10 out 13 351 4 0 4.43 35,77,102,144,177,210,247,287,309,347 MFYLLGLRLLKYITFRMAYA IRFWIIGLIFAIIALSTIKI 20 BB0164 10 out 4 337 9 3 9.28 33,59,105,129,162,210,247,275,304,331 MLFLVKEIYLQHLIQFFYVG GISLIFLLLYFLYNLMLFNF 21 BB0252 10 out 2 767 8 0 8.10 30,235,277,324,353,416,630,657,716,748 MDFEGLSIRYKGIIFTIFIL IYLFKPRVKLASNNNFKKLK 22 BB0258 10 out 2 266 4 0 4.11 21,57,79,107,132,157,179,202,235,264 MTNILSAIILGIIQGITEFL LYYFSIYLFALSIIVCYFVR 23 BB0591 10 out 2 416 0 3 -0.82 18,51,205,234,263,286,323,352,381,405 MILIFVLISLNLLIQYYLKL FLILSIFLITYIIYNNETKK