--- -------------------------------------------------------------------------------- --- --- All proteins with at least 3 transmembrane helices in Bacillus subtilis --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 594 ydas 3 in 16 85 5 9 -5.59 21,46,75 MLSFLVSLVVAIVIGLIGSA IGAAIFVFLLGLIFRGLRKE 595 bofa 3 in 8 87 3 9 -3.68 21,50,80 MEPIFIIGIILGLVILLFLS ISGILGIPGIAALVVIKQFI 596 ywie 3 in 7 500 3 1 -3.50 24,48,79 MLKRRLEFFFLYMMLIGAYV YKRGVADRTKESFARLFSGV 597 dgka 3 in 6 114 2 2 -2.49 52,74,111 MNRFFKSFVHAGRGIWETAR AVCVFAVISCIIGLLIFLPK 598 xylr 3 in 6 350 1 0 -1.54 64,191,286 MTGLNKSTVSSQVNTLMKES NAPALGMSSIVIDHFLDMIT 599 ydbl 3 in 5 111 6 9 -6.22 32,61,95 MRNFITALPIVLLLGFSFVS GYLTYMLIYLGMKQDRDANP 600 yhdk 3 in 5 96 9 9 -9.61 32,56,86 MELVRIFKEHNVFGWISVGT LFVIICVYTIVSVDTNLQFG 601 cits 3 in 4 542 9 0 -10.77 32,196,435 MVKKRFHFSLQTKIMGLIAA VFIPKEKQRGNPFDSHRDCG 602 ctaf 3 in 4 110 9 9 -16.60 47,71,108 MVDKKSRGHINSDLEFKKKK LYSGVFVAFITVLAFVTIIW 603 ydze 3 in 4 78 9 5 -26.00 18,45,68 MYLGIVSTACAFLLWNHGLQ SFLILSGVLLVIKEKEKEVK 604 yufv 3 in 4 113 7 4 -7.39 21,43,89 MEILMAVLAGIIFMAATYLL RAYQELESDDMGQMRGNDQH 605 yckc 3 in 3 151 3 0 -3.83 42,64,112 MNIYKPAGFWIRLGAALLDY VTYATPGEEELNADEEIRKS 606 ykoa 3 in 3 89 2 9 -2.65 23,45,81 MRLLTLTEYCLLIFFTGFYL AIIGSVFITVLCIALVASFS 607 ylmg 3 in 3 90 5 0 -5.23 28,55,83 MILYQVFSVLSLLITIYSFA AILVLRFATTGLWGLYRMIA 608 ytfi 3 in 3 226 9 4 -9.93 18,147,199 MVYVLTAILILIGIVLLLRM ELSVLKKNPSARMTSKNDSS 609 ytza 3 in 3 127 9 7 -14.37 19,41,101 MRFLFLLFIVFPAIEIGIFL CKPILFKWLRGMSKNKRIII 610 yvqe 3 in 3 360 9 2 -15.98 44,66,91 MRKKMLASLQWRAIRMTTGI VKVPIFPEEKGENERDSSII 611 ywre 3 in 3 111 3 2 -3.14 21,73,111 MTNFWILMLIAITISLASQF YMYHIVEVSLMFMLLIYVCT 612 yxai 3 in 3 151 3 8 -3.59 34,79,132 MEKPAGFWIRFLAYFIDGII IAFGEKKGLHDIICKTRVVY 613 yfkc 3 in 2 280 6 3 -6.31 33,86,111 MRMKETLTEIFQNKIVDILL RQLYQNNVQMLEEAVRIERT 614 yisl 3 in 2 118 9 9 -9.50 58,80,112 MTHLHITTWVVALILLFVSY VIVLLLTVLLGLHLPIGFQL 615 yrdb 3 in 2 123 4 1 -4.19 31,53,104 MEKLNQTNLLLRFTLEIAAL LCLIILHYIISAERIKWLLN 616 yuid 3 in 2 158 4 5 -4.11 27,85,158 MELLTNFPLLSSLAAIIFAQ EVFFGGLTGILLTLVLAYFF 617 yvfa 3 in 2 109 9 9 -11.47 30,66,103 MKFTINFSANLTAFLLSVFL VLISLLLLLPLAVRLFLLTA 618 yxjm 3 in 2 406 6 0 -6.18 34,63,113 MNGQTPARHYYKKLVPSLIL LKIELSLPLMTTNKEQKDEQ 619 qoxd 3 in 1 124 8 9 -8.11 34,57,96 MANKSAEHSHFPWKHIVGFI DHMDGNPPGGAEHSEHSGHN 620 spoiisa 3 in 1 248 9 2 -16.67 20,55,83 MVLFFQIMVWCIVAGLGLYV LFTSLTSIYDLVLPIEEEGE 621 tagb 3 in 1 381 4 1 -4.49 25,106,294 MKIRSLLANCYLYFLSAIAF NKYSDGNSSQNLLNFIENLI 622 ybgb 3 in 1 91 9 9 -13.33 29,64,88 MFLFTNGKVLWGAVIAAFIL QFVFAVYILLICHIVVLCLA 623 ycbu 3 in 1 370 9 0 -9.46 95,220,276 MEHLPEQYRQLFPTLQTHTM YNTKEEMRHAIDEIAAKTIH 624 ydcq 3 in 1 480 5 1 -5.35 45,84,254 MSDFLNKRFWKYRGKRIRPY VASGSVSDQTASGEGVSEAN 625 ydfd 3 in 1 482 3 2 -3.67 195,428,455 MSFPEEKKMKKLPKYRQIVH LEDLQKGIYELGLMIKELAS 626 yeek 3 in 1 378 9 1 -19.07 111,134,178 MTDTRHMYGGPGFGHYQGFG KVTADMDRLQDHVDVSLSVL 627 ynag 3 in 1 91 9 9 -25.00 35,57,87 MNVKKAAAVFSITIPIISAI NAIMFPFPFFWFIGGALLFG 628 yqgy 3 in 1 81 9 7 -15.08 23,45,71 MNRMFRVLGFWTGIFAVMFY IFFAGFTYYSIFIMVPGGGG 629 ytab 3 in 1 155 4 3 -4.29 23,64,124 MKKIVGALAVFVITYALFSA PYFLWSAFATFLSFTINSMN 630 yugm 3 in 1 123 8 9 -8.33 33,58,106 MFMKQLVKHLIIAGFSAAIL YFLIECAFFPVGRAKETTIS 631 ywdc 3 in 1 142 2 8 -2.49 43,80,119 MMFNMALNLFYHRLTLRKPF RPLVQKRQYQYNRASLNQLT 632 ywob 3 in 1 154 9 6 -16.88 36,106,129 MMNKGGRLRKAVRKSIPATF RRKFMGIFRQEPIDSRQVMK 633 ymfd 3 out 35 124 9 5 9.53 58,87,111 MKNIIALSSVPLVMTLGNSM LQGIGSAGDRSDCHAVYRRP 634 ebrb 3 out 17 117 6 9 6.47 52,78,100 MRGLLYLALAIVSEVFGSTM GVVVLNQSKAHAEDKKQTAC 635 yvem 3 out 16 598 9 2 14.59 52,84,109 MIIALDTYLVLNSVIAGYQF LRARLFAAINTSEEMTAASV 636 yvrl 3 out 11 136 3 0 3.19 62,100,131 MKHQNPSKRLLRLSIKYLLA EEMIVAAVFLILDKCNSALP 637 yhdu 3 out 10 118 0 8 0.72 54,79,110 MTLAGIFIGGGLGAMLRFWL YIVLTLCGSLFAFWCGWTIT 638 yhdv 3 out 10 131 9 7 9.20 51,78,115 MKIYSAVFIGGALGACLRYG IGVFVGRRIAGIQQRKGLQE 639 yfjf 3 out 9 109 2 8 2.22 53,76,106 MMLITILLFLAAGLAEIGGG DWIGAFICLIGVCVILFAPR 640 yycq 3 out 7 82 7 9 7.06 23,50,72 MGAIAVLFIVFGFPIVAGVF MYTAIALVTSVATLFLRKFF 641 ykut 3 out 5 267 1 4 1.72 37,89,111 MDFIKQYDWAGLITNAGVLL ERVLRKEIKNAFDRAFPKET 642 yczc 3 out 4 127 1 0 1.15 40,62,105 MELAGFMLRACALLLDVIIA FTKKKQTVHDMAAKTIVLKA 643 ydfr 3 out 4 225 2 4 2.60 52,80,102 MNRLPFGYIKLRLAGRKANP NQNIFDEVGKKNKKNVPKKL 644 ypjc 3 out 4 215 4 3 4.56 18,50,106 MFVYTLVGTVALSLFLSIFQ DVHDVLGEGFTLDENKNPLP 645 yteq 3 out 4 163 9 6 9.81 47,90,149 MINELIVFFGGEKINFLLNE GLILVMLANRLAKKFGEEGI 646 yvrm 3 out 4 253 6 7 6.18 149,204,234 MMINEAVRDELFPDGEALHK FGLLPSIKASKLQPVDALRY 647 ytej 3 out 3 164 2 7 2.69 54,89,140 MDATYEELERNDIKGPQEAE KQGIHDYIADTTVVHEKLYR 648 yufc 3 out 3 94 9 6 18.04 24,55,79 MFTLILQIALGIMGVSTFLY GTIAFSKFLEKGEIIENDRN 649 azld 3 out 2 110 8 6 8.66 26,63,100 MTMTMTQQMITIAMVVLGTM NMLLSIAGGTVVYMVLVQLV 650 yetf 3 out 2 231 9 3 9.54 26,54,77 MGNYLSVAVELVCGLGILFI FAEWHKNKPLYTVTYEQSRS 651 yqxh 3 out 2 140 9 8 14.61 38,81,103 MEETSLFINFETLDLARVYL RLQTIENEKEQSKNNADKAA 652 yrbg 3 out 2 218 9 3 19.06 25,51,78 MEELLTIAFRTVVLYFVILV ISFCSFTDGEIYIDEKDGHR 653 yuib 3 out 2 106 9 9 14.21 30,52,94 MISLPVVIISIVLFFVLFFG AGAIVSGIAINMLRKRGYQM 654 ywcd 3 out 2 127 9 3 14.62 23,45,114 MYIIMGVFTTIVNIASFYIL VVVNYVASKWLVFKKTKEEG 655 ywla 3 out 2 120 9 9 13.07 40,81,110 MKYNYTVLLSAFTMSVLYSV AVLTALIYWIWDSVLLQKKE 656 ywrb 3 out 2 197 5 8 5.44 101,126,174 MKNHPYRDMTAAMVRTGILG HFKLKDKITNKHSKDKGMSA 657 yxce 3 out 2 216 7 2 7.01 26,162,204 MKLKYVKALVAVTVALGVLL LIIVIALIRAFKAPKTYRRR 658 eag 3 out 1 143 9 9 21.23 58,80,123 MKELAILITEMVNQFHDAFI IKILFSGRPASKSNGNARSR 659 ycgq 3 out 1 285 0 3 0.89 49,109,226 MFRLLVLMGFTFFFYHLHAS VKVTDWNTIKKPDDPYVYRG 660 ydak 3 out 1 283 4 4 4.62 32,65,109 MKISFSESQKLFAYFSGLIA DIQTADQFLEELENEMMMNE 661 yddd 3 out 1 174 8 2 8.50 51,81,104 MGRLVFNYRKAMREPKKIQQ NKNGRRVGVLPNKKQFDSYA 662 ydfs 3 out 1 235 9 3 11.40 24,51,79 MIELEVVIRTVASFGLLLIA GNGDIYVDQYKDHISVPMDK 663 yesk 3 out 1 129 9 9 13.01 60,95,117 MNSWVLMRPDIICLRKRLRQ VIFGAIAGYLIDKAIRRYRK 664 yjga 3 out 1 132 4 9 4.21 30,71,123 MKRNRWIYAVFTILIIGLGL GIAACAAIELLVLGIKKRRC 665 ykja 3 out 1 243 5 3 5.45 22,54,76 MLWMVWVFLLKPVIVFSIAY DLNTANEPQHDPYLYKPGNN 666 yndm 3 out 1 179 7 6 7.46 72,108,135 MTIMNGFELHYLSFVYAQEF LQYQTEAADELFPETKEKHK 667 ynze 3 out 1 101 9 9 18.18 32,64,92 MLTDPAEEAFLPNFLLLGAG IWMVCAYCMYLLIPLILSHK 668 yobj 3 out 1 280 9 1 16.03 30,181,226 MELLDIWNWIQQNGILTAVI GKIGNWNVERRARRVRNDED 669 ypbq 3 out 1 168 3 7 3.28 59,84,149 MFWLLIAILIVQRAAEMAVA AVLLSVRIRAEDKALQEYSV 670 yqxl 3 out 1 317 9 1 12.42 135,258,289 MKAHTGKDWFWYQMGPQERS WTGDMLQERKKKKKPRKRRT 671 ysda 3 out 1 89 7 9 7.43 18,55,85 MIIAAYLVLINLCGFWVMGI VPLLLVIEAILIAIYYSPFD 672 ytvb 3 out 1 111 4 2 4.04 23,57,87 MKMLHQVLIACVIGGIMGIL RELNSGGEPAESKRQTKTPP 673 yuaf 3 out 1 174 9 7 10.53 31,62,92 MELFGVPIQTMYLYTLIIAG TTVLVVDINNGVLSVTPHEP 674 yvft 3 out 1 328 9 2 15.08 46,84,111 MLLLFVAAYRQLFCSVGKAS TVSDHNGTVVALTIPLIKKA 675 yvla 3 out 1 108 7 9 7.14 28,68,97 MNRNQAIIASLCYFSVFIAP LVVIGIIIWNVIQGIKVLRA 676 yvqf 3 out 1 241 3 3 3.65 38,81,194 MTKKQLLGLIIALFGISMFL SKRRVKVSVSLFIGDVDVKY 677 ywce 3 out 1 87 9 9 37.50 22,46,76 MMDMFFAYLLVASATPLFIW VAHIAAFIIYGLPYLRRKRS 678 ywmf 3 out 1 159 9 3 10.77 29,109,131 MFGFNDMVKFLWSFLIVLPL SSDGLAIYKVLRYGERYEID 679 yxeg 3 out 1 185 9 7 12.22 31,88,134 MRNQKAERLVAAGLVLHIIQ RLNRIRRKPSLPVEYQKEKT