--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Aeropyrum pernix K1 --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 371 5105476 1 in 83 485 1 3 -1.44 167 MFKTFVAGNWVLTSNLAVVR YVTALKTIVYNYRGRGIWEY 372 5105026 1 in 17 660 1 2 -1.32 172 MQEGLEKKIWYPPRDIVDQS VLENPEAVEKLRDIIKRIGG 373 5104805 1 in 14 349 3 3 -3.64 105 MPPKRDGEVLVLGIESTAHT WRIDEVDIPWYPWLPGDPPP 374 5104251 1 in 12 210 9 5 -14.00 202 MGVDLKMLAVALALSAILVG VAIEIDGVGTFVFPALYDAL 375 5105131 1 in 11 246 1 5 -1.76 162 MAGPAQAGVELIRDGRRHDG VVEMEKEAIRKSYLEVGGGQ 376 5104638 1 in 10 532 9 2 -12.00 156 MEPPGWADTGLAHVGSRILA IAAAVIIILAALGAAFFLLR 377 5104866 1 in 10 104 3 9 -3.37 32 MTSLDRDRIVGFGLLIGSLA KLEQEIKHENQATGEEESRE 378 5104505 1 in 8 421 9 2 -12.00 107 MLRRRVLMDGGGSAGSAPSS RRGKLAYSEILYPGGVLLEL 379 5104567 1 in 6 852 4 1 -4.57 32 MRGKARRGQAEVIGGLIIIT FSALKTYKEVLEQLLNTQGQ 380 5105433 1 in 4 132 6 9 -6.04 75 MRVLLPRGFSLTASSRVMAL VGPVGLMTPLHPHSLRPLQT 381 5105597 1 in 4 203 9 8 -12.36 32 MRRRRGIVGIEAAIVLIAFV ALTVERIVPASLPTGGAVSL 382 5106230 1 in 4 154 9 9 -9.00 143 MTLSAKFMTALMTCSTMIMV LYAGHPVISTPLYITLPLSG 383 5104223 1 in 3 194 4 6 -4.00 132 MPLRRKSLYPSLSTLTPNME RGLLTTLLPRARSARKSILW 384 5104396 1 in 3 201 9 7 -16.00 187 MAAYGLPSVDELAVIALLLS IFFVLPMLGYQVSIGGGGVF 385 5105871 1 in 3 136 4 9 -4.56 91 MGPGVRFVIPSGILISVSAL SSSSLSMRVFHSGMGFSLLY 386 5106241 1 in 3 126 1 9 -1.50 66 MTLIATLMWKRLAIQRSKWR NDTLSNNKHPHGKVCEPREA 387 5103440 1 in 2 175 4 8 -4.50 27 MPSALLRTIAIAAVLALVFI VNAILKGCHAAYDSEKAVVE 388 5104471 1 in 2 102 4 9 -4.23 89 MAPMNTVKSSTGPTLTLSSS GKFLYLSRFCAIIFQSLTKV 389 5104795 1 in 2 156 9 9 -12.08 34 MGTPFRKSFRALLYVSAIFS LASLAKDSSITSLDLMSRLQ 390 5105599 1 in 2 246 9 7 -21.45 34 MRRRRGIVGIEAAIVLIAFV DSTSDATTGTTTYAVAPVDL 391 5105724 1 in 2 124 3 9 -3.40 69 MQTCNSISKIRLHGWAERAR SASFASLSTLAILSRRFLLY 392 5105769 1 in 2 272 4 4 -4.72 159 MKSSYSTNGGSGSTRKVRVR IVFPWERREVEEELKASGYN 393 5106269 1 in 2 210 9 5 -12.05 40 MSRSDNGGEDKGLRITRREF FAVGFTALVYGRYDNLQGVK 394 5106297 1 in 2 101 9 9 -10.56 95 MSLSSLRVENSFSASRGVRL LERYIAIFSSTVILSTSLNC 395 5103406 1 in 1 130 0 8 -0.42 42 MLLPFRAAAARAPAPLTPAI HGVAINPSEPGGIEWMSSTA 396 5103412 1 in 1 107 9 9 -10.00 99 MAADIILLKLSRYSAEHLRL FIPLFQRTVLKWIAEVYGSV 397 5103514 1 in 1 332 5 3 -5.75 316 MENGFNHLFIITHTDLDGIG LYAARLVAAKASELSLIEAT 398 5103562 1 in 1 129 0 9 -0.57 54 MSPLLTSIIRGADARVSSTS LRRPVVLHDTTRRLPLPLLS 399 5103668 1 in 1 268 5 6 -5.09 31 MAWELSVPKLVFAALLLLSF RFVVEHSYVFADYGVEVGGS 400 5103926 1 in 1 195 9 6 -10.24 154 MTPSDIPGYDYGRVEKSPIT FKSVVLQVAIWSHPYTKEND 401 5103943 1 in 1 802 9 1 -16.67 30 MRWMSNSRSIGVRIAIAALI IQGYFYNPFYGGIWYYALTK 402 5104009 1 in 1 659 8 1 -8.00 538 MSRGLRLEEIASGLPAAAEA VTAWTPRQAALGVLRHILRR 403 5104182 1 in 1 319 9 4 -11.62 51 MLQEAREPARPPGTPWVVLV EGSIIDKLSYIAVQIEEGIY 404 5104520 1 in 1 112 9 9 -11.32 66 MAGAGAARPGQHGSGGGPIC GGAALILYRGEPRGCGGGAA 405 5104683 1 in 1 175 9 9 -13.53 37 MVKPEVRLRRGISPVIATVI SGVISVPTVVSEGIAGQANS 406 5104702 1 in 1 363 3 4 -4.00 203 MYRRVGYAVEEPGGEPPVLG RPIIGQEPLTPTPGGLGGFT 407 5104713 1 in 1 333 9 3 -20.00 252 MVGQREPEDIMRPLSKLEKH MRAFRPLKYAFERYWLEKWF 408 5104827 1 in 1 373 3 3 -3.75 357 MKPLRGCPGTAAAGGEAPCL VAIATVLYERSSQLEEGGGG 409 5104849 1 in 1 53 9 9 -9.54 37 MMLLQNYYNTRNIRYESLFI IRSNFMISERVSSATDICVI 410 5104881 1 in 1 265 2 6 -2.00 112 MKEDDDLRKDDSYFVILVEN AVTRFSQFLKATVETVKLVK 411 5104912 1 in 1 252 4 6 -4.00 135 MCGMQVQEGVPALGSRERFR EVRGRGKLYSLTDLGYMLVG 412 5104998 1 in 1 166 3 7 -3.67 142 MMGVGGRGGSSTLFTSQARS DGQCIIRGSSPGWYSLSSRN 413 5105096 1 in 1 108 1 9 -1.63 74 MSFSSSLTSAMRDRSSAVRT TWALLARAPRVNMSRMRGNT 414 5105132 1 in 1 235 6 6 -6.00 91 MSSERQLAGRIVVPGEPLPE TSGLTKRIIKFIEEERRIRE 415 5105176 1 in 1 180 9 8 -10.00 100 MWTSILSLESSTTSNNSLFS PPTPPPPTTRTLAPLTLSTK 416 5105208 1 in 1 107 2 9 -2.00 92 MYLPGNILAAHSILYHYLPE LVIYTLVLGYIPQPLDNVLL 417 5105260 1 in 1 536 6 2 -6.00 444 MLERLIILSGVTGTEISSIV TQDLERAAEVYKGPGSFRLV 418 5105261 1 in 1 191 9 9 -12.50 31 MFILAVRCLAVFLLGLMMGV NPDMQAMLIAEITNDTNIDI 419 5105296 1 in 1 214 4 9 -4.00 151 MGGQQAAIFMAERVYEARRE SPLSRAYKDLLGMDVRRMFR 420 5105300 1 in 1 141 0 9 -0.31 128 MVASITPSLLTRTRLPLGII AAMCTSRLFIDFLATPPSLK 421 5105408 1 in 1 196 2 7 -2.50 31 MARNGLVYEYMFIAIIVAVL ILEYIAGLLSSTTGLALIPP 422 5105490 1 in 1 344 8 3 -8.00 283 MRLRPESEEDLWLLRITLRP VSFGGVIALLRYPVPQEARR 423 5105574 1 in 1 820 9 1 -9.09 29 MRTSGCMIVGILSRIAPLLI GLSVLALLAGLGGVVLAFRK 424 5105586 1 in 1 239 2 7 -2.57 186 MSGVTAKLVREYVAGDPVLL YSVAEAAVGTGGGSTQPLQG 425 5105781 1 in 1 154 4 9 -4.00 143 MKTSPPGMFFLPSSFIHILP GLIMLILASTFSSMYMSIGD 426 5105814 1 in 1 394 2 3 -2.00 108 MGSMGFIESEVAVVYGRIVE YIPDVESMYEASLALEGGPR 427 5105835 1 in 1 324 6 3 -6.50 26 MNQRLMIAGAAVVIVIILIA IVPIPLHPGAEKYYKEQGVL 428 5105938 1 in 1 194 6 8 -7.00 41 MLIWAKHLFRLLAGFRVLYG QQEELDNLVDLTRALVTSGN 429 5105955 1 in 1 583 5 2 -5.11 36 MKGGGDIGMGFQTNRTTIYI PELAETIEIVGSIPSGWQIS 430 5105958 1 in 1 515 9 2 -11.64 30 MALANTRVILAAIIVILVIA TEVTSIEVSPLQFLIYSSIS 431 5105977 1 in 1 105 7 9 -7.71 98 MLLQACLWCYSRACWGLEGQ YSMAAVGRLALPFLGMSCRS 432 5105990 1 in 1 191 7 8 -7.33 134 MRSYPSPAGLFKLPDGQLLL VEGEDDIRERKEFLRKIGYK 433 5106022 1 in 1 183 9 7 -9.38 57 MYSSSQETPSHLRSWRMRSY YPRSSLSKSSEPNLLTPEAI 434 5106150 1 in 1 365 1 3 -1.23 318 MEQPGFKLRAVTIHFEASAD GVEPGDEVFLKRFGEVPVIP 435 5106237 1 in 1 159 8 7 -8.00 139 MVILPSLRSRSMRLLSLLQG VWTPSTPSQQGLAPEPQALV 436 5106274 1 in 1 221 5 6 -5.51 56 MLPAPSSSYLLQSFGVACLD YAGTTPSLGELESVIKSVQG 437 5105852 1 out 16 278 9 5 19.12 37 MVWMVGVMIIPGVNVLLGQA AEDMIGLMAQGMQGRVLERR 438 5106298 1 out 14 470 0 2 0.75 50 MLNILPPTILGPICPACQCG DTYDSIIEELKAGNLEAALE 439 5104252 1 out 8 112 9 9 19.14 59 MMAYYGANIASKPLLLDAGD SLKSEIEEIKRLLSERKREE 440 5105993 1 out 5 515 9 2 13.72 509 MTIILLAPLSSLEAVGSPAS IAAAVAVIVLGGIGLFLLTR 441 5106074 1 out 5 169 1 7 1.63 31 MTMFSWARAVFLLSPLGSGI LPSGVVNLRVRTPTSPRFSS 442 5103483 1 out 4 109 5 9 5.20 53 MSFIVPCLGDDITILSWPKT RRCTFRGMKTNVRAESLADK 443 5106184 1 out 4 113 5 9 5.66 46 MLSLWFSSLRTGVISLHPRD IRVNLHYHRDPRHPTHPSRD 444 5104266 1 out 3 144 8 8 8.69 114 MNNVAPARVLTLTWTVTATM KVSPARETRGSSVPGFTRTT 445 5104997 1 out 3 114 7 9 7.50 61 MVYRGGPWPAYPHLSARVQH RRRLKQNREGVSNASHGKTP 446 5104442 1 out 2 181 5 7 5.32 22 MLPILTPFIILLIILSLPSR SLPETKFSKVSRLTIFTPYL 447 5104477 1 out 2 157 8 8 8.00 25 MLTPPCIGFFITAISPIISI NLAEPLREYVRKRGVPRELL 448 5105122 1 out 2 182 9 6 9.15 158 MLSRPTFLPPPRLPPLLEPP HKDEAREPVELGVLRQAFKL 449 5105139 1 out 2 108 2 9 2.64 43 MPRVNVPVLSKTTIDAFASL QKNIPETLSASLCISILPAW 450 5105297 1 out 2 228 9 5 36.00 28 MEITGETLANAIVVLILAAL GPVVEEVLSIVQAAAEKARQ 451 5105426 1 out 2 144 7 9 7.96 30 MAMWPWTTSCLAWYMVLARP FFLGFLGSPIHIHPLRPTSS 452 5105442 1 out 2 113 3 9 3.27 82 MVILSAPCTPFFIAPLAASS GHPRSPSSLELQVLKAPSIY 453 5105676 1 out 2 176 9 6 9.82 52 MFSLSSISLSIRSLASLPDI LGTLENNLSATLLLGQHRHP 454 5106030 1 out 2 155 9 8 12.74 64 MAPFFSSSSASCGSTGLYIL GSPLYPCGPLPNPSPPRGSQ 455 5106089 1 out 2 117 9 9 10.69 78 MLSRVQPTPSIQTGLSVTLL SRANIQSRFGPRGLSRTGSQ 456 5103449 1 out 1 427 9 2 24.00 190 MNRRDFLKLAGAAGAGLVVG ERLGRNPLWVMDWLHENAET 457 5103459 1 out 1 325 9 4 10.00 84 MKGIEGYKDIKEAAREASSF VAREGRLLGKPRPLKPGTIL 458 5103463 1 out 1 110 9 9 14.75 94 MRSRKTGQHMGETVHETELA VGEGIQLYRIYREPVRFQNE 459 5103479 1 out 1 449 0 2 0.00 251 MAPGEVTERERLEEAARTIL RPFKLPHIIVASSPGIEVRR 460 5103481 1 out 1 230 0 5 0.00 105 MVMLPYIYITGKDREVVIDL HMLTQKYSTLMNESSNSEGS 461 5103488 1 out 1 128 9 9 21.00 122 MKVKFSRLFKRPPENSPSQS SAVWVIHCLVAQVPLLYKAR 462 5103545 1 out 1 159 9 7 12.00 39 MSDIVVTALLVTLTYYLGPG TPEGKIAVGRGELEYVGEAF 463 5103584 1 out 1 341 3 3 4.00 119 MLGLDASNDAVSRARSLGLE LGLAEKLLSLLPSHGVSLEV 464 5103923 1 out 1 103 9 9 10.19 46 MSSSTMGTNLSGFLHISFFN ARKGYQWFVVSGESRRFLRA 465 5103973 1 out 1 114 9 9 18.22 96 MVSRGVLEALVIGAVAFAVL LLASTASLAVSEVSRYFSRR 466 5104019 1 out 1 199 8 6 8.00 109 MRPGQRTIHTPPASFKAVVP ESTLTRAESLFNYMHTPDRL 467 5104034 1 out 1 127 6 9 6.29 106 MGTASTPPNSLNISAFPSIT SELLSPAITRATQRRVWSVE 468 5104048 1 out 1 105 4 9 4.64 59 MTTCSIRLVSGTLPRASPPS TLRGAPVPTTGSPGLRPLVD 469 5104311 1 unk 1 336 0 3 0.00 18 MLLTLIILVVIAYSVTITVE ILKSVSGDLLPILSSASFKT 470 5104388 1 out 1 284 9 4 28.00 279 MPVIGLYDSRDVRVIDWQLQ AGGALAAAIALARAVALARR 471 5104454 1 out 1 270 3 5 4.00 162 MFLDGEEGLIGYIIVTGTAG AKAQQILAGGDDYKIYDITG 472 5104512 1 out 1 129 8 9 8.29 115 MWGVAGLRALNMAVFIFLLS SFAAALAFIQFVRGVSTRGM 473 5104515 1 out 1 105 9 9 9.11 96 MQGFIAYLVGFAVVAGVAVA AALIVGLALLLIAVIRQTGG 474 5104633 1 out 1 311 4 3 4.00 187 MPVTPLGRRCRGGSAIEVEL EAGFEVLGFRRRALGLVAVK 475 5104734 1 out 1 242 8 4 8.00 122 MRLISVRPNIDTRGGREPAA VSGGPVFERLRLLGPLLSGC 476 5104743 1 out 1 539 0 2 0.00 213 MERELGPWRLTFRVRGWLSD YEVIARGTGEELQSRRRRGR 477 5104797 1 out 1 109 9 9 22.00 31 MPLPFIDDSPLAWLQPLILA VVKPEEEKRERAKGIRGLLR 478 5104822 1 out 1 183 0 9 0.00 163 MDFVGVDGKACNSISEIHAI AFLQFYLEDSRYTLIAPGRS 479 5104832 1 out 1 173 9 7 36.00 32 MPLDSEVLAAALAGLVAGGV GTVKGALRAFRSPGAPGRGG 480 5104905 1 out 1 374 8 3 8.00 301 MVCILYTPGHNLYTDTLILY YLAKQLDRLAEGLAMVWESG 481 5104949 1 out 1 381 9 3 14.00 113 MASLGEILEGRATDIYFVRT LPSLDEIRSYVLKQLENLGL 482 5104950 1 out 1 184 0 6 0.67 148 MSRAHLTSSTISLILPLLLL NLPSTTIRGSFLSKTVPSGR 483 5104979 1 out 1 127 9 8 9.41 86 MSSLNILLPSITYITPLLAI LLYRVPGTVNLAGRLELAHK 484 5104990 1 out 1 157 6 8 6.00 50 MPVGEGGEAVTYTGAVTIPY GPHEPSEEMVRRAWRLVRDE 485 5105137 1 out 1 154 4 9 4.71 95 MPLPKNPLLRFLLPLVFVGS YPNSSYDYSLLGLVAEGPGP 486 5105243 1 out 1 279 9 4 14.00 165 MKSEIDKDLCILNIISTIHK ELSKLAKEGLIKRVKEGVYK 487 5105267 1 out 1 114 0 9 0.31 44 MGPLSFGMALRSAWVYGCWG SRARAMAITTLCFCPPLSSW 488 5105306 1 out 1 134 2 9 2.00 99 MSGTPISLYFMAASNTCITS SRGMLSKYGGFLMYVLFGSQ 489 5105337 1 out 1 406 9 2 10.00 143 MEVEEGLVTILGAELSAGDR IFGRVKLGEEYHEEIRGRIL 490 5105344 1 out 1 105 5 9 5.42 67 MGFMTVVLICTGRPAASASL SRILQKSLLIRGSPPVMTSI 491 5105477 1 out 1 118 2 9 2.86 50 MAILDAADLRSASARTMAGS TMKALPGIVLYTNLLTVSKR 492 5105532 1 out 1 160 3 7 3.79 141 MPGCPSGPRGRAGDPLPREG LLARMRDETMAASVAACTES 493 5105589 1 out 1 117 4 9 4.00 92 MAYRLPNLLPQLEYKVVELA PPVTTSYPLRGGYGYYLVEG 494 5105593 1 out 1 161 9 9 12.00 31 MGESTVIAHALLTIVAVTMA PVKLILVTPTGAKMSFVEPA 495 5105635 1 out 1 298 8 3 8.00 118 MGLRLELTGSIQPSARGLRV MAGAGLDVRLLKPSTGPPRL 496 5105651 1 out 1 168 9 8 12.00 89 MLRGSSTPSTLDRLVQSLCL DDEFSFSTRNDVPRAVGLAA 497 5105716 1 out 1 214 0 5 0.00 147 MGYLVSKHLALSLGSSKRGY LETISRMIEGEEEKESGGIY 498 5105840 1 out 1 142 2 9 2.29 135 MTGGAIQTSLFDLAVIMLKK LLFLATTALLGLLCRGCFAL 499 5105862 1 out 1 107 0 9 0.64 73 MGWRVMLDLLVQAAHRISGI TMIEKHAKYRDGLAAYASLG 500 5106048 1 out 1 132 3 9 3.35 61 MQVSPIIMKVAVPSPQQVNM TRLLIHPNNLAPPATPARPQ 501 5106070 1 out 1 137 9 9 11.00 127 MPIATRPPGLASSTSILPNL LTGMIGLPSAIVPLMKFRIS 502 5106153 1 out 1 193 9 7 12.00 88 MGFQGFPPSFMLEPIIKPSA EETSRTILVIAETWRGPGVL 503 5106163 1 out 1 117 0 9 0.82 64 MFSISRSLLYFEVLSPRAGA RSSPTIMVSVERASTAALKP 504 5106193 1 out 1 107 1 9 1.50 60 MSLSVTMPRSLPSSSTTSTL ATELFAFTGFQQPYVEPLYI