LOC3d: (database of predicted subcellular localization for eukaryotic PDB chains.)




It is Database of predicted subcellular localization for eukaryotic proteins of known 3-D structure.
How Subcellular localization is currently predicted using four different methods: predictNLS (nuclear localization signal), LOChom ( using homology ), LOCkey (using keywords) and LOC3d (neural network based prediction). The reported localization is based on the method which predicts localization of a given protein with the highest confidence.
You can
  • search the LOC3d database.
  • browse the LOC3d database.
  • Predict subcellular localization of a protein using LOCtree.
  • download a compressed version of the Database

From Here
Who are we?
LINKS to subcellular localization related services and documentation
Contact Email:  nair@cubic.bioc.columbia.edu
Fax:  +1-212-305 7932
Tel:  +1-212-305 4018 (Raj Nair)
Version October 9, 2002  



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