08 September 2010    
 
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Protein Prediction SS 2010 at TUM

Burkhard Rost, Marco Punta, Andrea Schafferhans

Material for lecture

2010042023_Rost_PP_Intro.pdf

Slides for the lecture 00 and 01 - Intro from Burkhard Rost

11.8 M

20100427_Punta_PP_IntroProteins.pdf

Slides for the lecture 02 - Introduction to Proteins from Marco Punta

46 M

20100430_Rost_PP_ProteinInteractionSites.pdf

Slides for the lecture 03 - Predict Protein-Interaction Sites from Burkhard Rost

2.9 M

20100430_Rost_PP_ProteinInteractionSites.tgz

Slides for the lecture 03 in Apple Keynote format

6.9 M

20100504_Punta_PP_ProteinsAnd_Alignment.pdf

Slides for the lecture 04 - Introduction to Proteins and Alignment from Marco Punta

31 M

20100507_Punta_PP_ProteinFunctionPrediction.pdf

Slides for the lecture 05 - Protein Function Prediction from Marco Punta

7.3 M

20100511_Schafferhans_PP_BindingSiteAnalysis.pdf

Slides for the lecture 06 - Binding Site Analysis from Andrea Schafferhans

4.0 M

2010051821_Rost_PP_Alignments.pdf

Slides for the lecture 07 and 08 - Alignments from Burkhard Rost

7.9 M

2010051821_Rost_PP_Alignment.key

Slides for the lecture 07 and 08 in Apple Keynote format

21 M

201005280601_Rost_PP_ProteinStructure.pdf

Slides for the lecture 09 and 10 - Protein Structure from Burkhard Rost

8.8 M

201005280601_Rost_PP_ProteinStructure.key

Slides for the lecture 09 and 10 in Apple Keynote format

43 M

20100608_Rost_PP_ProteinStructurePrediction.pdf

Slides for the lecture 11 - Protein Structure Prediction from Burkhard Rost

8.7 M

20100608_Rost_PP_ProteinStructurePrediction.key

Slides for the lecture 11 in Apple Keynote format

45 M

20100610_Rost_PP_1dSecondaryStructurePrediction.pdf

Slides for the lecture 12 and 13 - 1D, 2D Prediction from Burkhard Rost

5.0 M

20100610_Rost_PP_1dSecondaryStructurePrediction.key

Slides for the lecture 12 and 13 in Apple Keynote format

12.3 M

20100618_Rost_PP_TMH.pdf

Slides for the lecture 14 - Transmembrane helix prediction from Burkhard Rost

10.4 M

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Videos of the lecture

The videos of the lecture you can find as stream at SciVee TV: Visit Protein Prediction at TUM Community

To download the videos you can use for example this very simple tool: http://www.downloadhelper.net/

Special thanks to the 'Multimedia Team' of the RBG group in the TU Munich computer science department (http://tumtv.in.tum.de/) for shooting our lectures. Thanks to Tatyana and Barbara for supporting this project.

Material for excersises

exercise1.pdf

Exercise I

70 K

exercise2.pdf

Exercise II Part 1

104 K

exercise2-2.pdf

Exercise II Part 2

104 K

exercise3.pdf

Exercise III

84 K

exercise4.pdf

Exercise IV

94 K

exercise5.pdf

Exercise V

153 K

exercise6.pdf

Exercise VI

87 K

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